RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	CHMP2B	Q9UQN3	213 aa		4.89	□□□□□ -1.63
NRXN1-223	ENST00000625891	OR1A2	Q9Y585	309 aa		4.89	□□□□□ -1.63
NRXN1-223	ENST00000625891	OBSL1	O75147	1896 aa		4.89	□□□□□ -1.63
NRXN1-223	ENST00000625891	CIT	O14578	2027 aa		4.89	□□□□□ -1.63
NRXN1-223	ENST00000625891	DENND4C	Q5VZ89	1909 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	MYH11	P35749	1972 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891		A0A087X002	238 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	hCG_38984	A0A1B0GV85	526 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	IQCM	A0A1B0GVH7	501 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	MSGN1	A6NI15	193 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	LGALS8	O00214	317 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	E2F3	O00716	465 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	MLNR	O43193	412 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	VPS26A	O75436	327 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	KHDRBS3	O75525	346 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	TRMU	O75648	421 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	DEXI	O95424	95 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	OR4Q2	P0C623	313 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	THRB	P10828	461 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	TDGF1	P13385	188 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	KRT13	P13646	458 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	EZR	P15311	586 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	GIF	P27352	417 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	GNA11	P29992	359 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	FEN1	P39748	380 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	ACADSB	P45954	432 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	OSTN	P61366	133 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	OVGP1	Q12889	678 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	EXOSC7	Q15024	291 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	TPD52L1	Q16890	204 aa	Predicted RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	TMEM41B	Q5BJD5	291 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	ARHGAP11A	Q6P4F7	1023 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	LRRC8B	Q6P9F7	803 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	BNIPL	Q7Z465	357 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	CATSPER3	Q86XQ3	398 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	DAW1	Q8N136	415 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	TCP11	Q8WWU5	503 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	PHYHIP	Q92561	330 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	N4BP2L2	Q92802	583 aa	Predicted RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	C18orf25	Q96B23	403 aa	Predicted RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	PRAC1	Q96KF2	57 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	LRR1	Q96L50	414 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	CXorf58	Q96LI9	332 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	WRAP53	Q9BUR4	548 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	RBM4	Q9BWF3	364 aa	Known RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	ZNF416	Q9BWM5	594 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	HEBP1	Q9NRV9	189 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	TMEM181	Q9P2C4	612 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	ADAM28	Q9UKQ2	775 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	SCN1A	P35498	2009 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	USP24	Q9UPU5	2620 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	KIAA1549L	Q6ZVL6	1849 aa		4.88	□□□□□ -1.63
NRXN1-223	ENST00000625891	LAMA5	O15230	3695 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	BPTF	Q12830	3046 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891		A0A1B0GUA9	196 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	LRRIQ4	A6NIV6	560 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	GPR89A	B7ZAQ6	455 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	HHLA1	C9JL84	531 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	SLCO1B7	G3V0H7	640 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	DYNC1I1	O14576	645 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	MAPK13	O15264	365 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CHAD	O15335	359 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	BUB1	O43683	1085 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	PFKFB2	O60825	505 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	PCCB	P05166	539 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	GPR89B	P0CG08	455 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CYP2F1	P24903	491 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	DPP4	P27487	766 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	ARPP19	P56211	112 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	TRA2B	P62995	288 aa	Known RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	HMGN5	P82970	282 aa	Known RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	PMP22	Q01453	160 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CSTF1	Q05048	431 aa	Known RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	RAPSN	Q13702	412 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	PSMD5	Q16401	504 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	C3AR1	Q16581	482 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	LRRC23	Q53EV4	343 aa	Predicted RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	AGK	Q53H12	422 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	LDLRAP1	Q5SW96	308 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891		Q6ZS52	159 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CENPL	Q8N0S6	344 aa	Predicted RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	C4orf32	Q8N8J7	132 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CCDC148	Q8NFR7	591 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	OR5AP2	Q8NGF4	316 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	OR10T2	Q8NGX3	314 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	GIPC3	Q8TF64	312 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	GATAD1	Q8WUU5	269 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	SMPDL3A	Q92484	453 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	MRPL53	Q96EL3	112 aa	Known RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	ERGIC2	Q96RQ1	377 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	CCDC94	Q9BW85	323 aa	Predicted RBP	4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	WWP1	Q9H0M0	922 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	ATP13A3	Q9H7F0	1226 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	YY1AP1	Q9H869	796 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	MAN2C1	Q9NTJ4	1040 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	MED17	Q9NVC6	651 aa		4.87	□□□□□ -1.63
NRXN1-223	ENST00000625891	GTSE1	Q9NYZ3	720 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms