RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 STK17BO94768 372 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 OXSR1O95747 527 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 MYF6P23409 242 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 LCN1P31025 176 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 CLDN6P56747 220 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 PSPHP78330 225 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 NCF4Q15080 339 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 PDZK1Q5T2W1 519 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 PAPD4Q6PIY7 484 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 SLC5A8Q8N695 610 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 GAL3ST4Q96RP7 486 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 FEVQ99581 238 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 MCHR1Q99705 422 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 POLR2J2Q9GZM3 115 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 POLR2J3Q9H1A7 115 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 KRT84Q9NSB2 600 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 NDUFA13Q9P0J0 144 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 PADI1Q9ULC6 663 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 PCDHGA3Q9Y5H0 932 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 SEC16AO15027 2179 aa16.3■□□□□ 0.2
SHKBP1-224ENST00000600718 TRBV4-1A0A0J9YWV2 114 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 FAAHO00519 579 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 TPST2O60704 377 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 ELAVL4P26378 380 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 CHN2P52757 468 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 TAS2R41P59536 307 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 FGD3Q5JSP0 725 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 UGT2A3Q6UWM9 527 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 RANBP3LQ86VV4 465 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 GRAMD2AQ8IUY3 354 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 CMIPQ8IY22 773 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 OFCC1Q8IZS5 231 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 ITFG2Q969R8 447 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 HSPBAP1Q96EW2 488 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 WDR77Q9BQA1 342 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 FUZQ9BT04 418 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 SMIM31A0A1B0GVY4 71 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 MITFO75030 526 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 FUT4P22083 530 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 KCNAB2Q13303 367 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 TBC1D25Q3MII6 688 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 HES3Q5TGS1 186 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 KRT80Q6KB66 452 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 C6orf15Q6UXA7 325 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 USP51Q70EK9 711 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 SLCO6A1Q86UG4 719 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 LINC00471Q8N535 108 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF441Q8N8Z8 693 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 SLC35B4Q969S0 331 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 TP53INP1Q96A56 240 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 VMP1Q96GC9 406 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 ANKRD19PQ9H560 264 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF556Q9HAH1 456 aa16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 PTRH2Q9Y3E5 179 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-224ENST00000600718 CCDC88CQ9P219 2028 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 LOC102723996A0A087X1L8 192 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 TEX51A0A1B0GUA7 166 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 SLC16A6O15403 523 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 ITGAMP11215 1152 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 NR0B1P51843 470 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF136P52737 540 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 RNF4P78317 190 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 IL1RL1Q01638 556 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 ST3GAL3Q11203 375 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 FGFBP1Q14512 234 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 ENTPD8Q5MY95 495 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 TMEM164Q5U3C3 297 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 HSDL2Q6YN16 418 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 GALNT5Q7Z7M9 940 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF614Q8N883 585 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 APCDD1LQ8NCL9 501 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 OR4C3Q8NH37 302 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 WDR36Q8NI36 951 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 DIO2Q92813 273 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 PRR14Q9BWN1 585 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 UBQLN4Q9NRR5 601 aa16.28■□□□□ 0.2
SHKBP1-224ENST00000600718 SH3PXD2BA1X283 911 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 CPSF4LA6NMK7 179 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 PRKNO60260 465 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 FMO6PO60774 539 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 UGT2B11O75310 529 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 KLF7O75840 302 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 CYP7B1O75881 506 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 OR5F1O95221 314 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 DLGAP3O95886 979 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 GNAO1P09471 354 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 FOXD4Q12950 439 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 TRAM2Q15035 370 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF770Q6IQ21 691 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 PLEKHM3Q6ZWE6 761 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 ZNF527Q8NB42 609 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 DEFB124Q8NES8 71 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 OR2Y1Q8NGV0 311 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 OR8K3Q8NH51 312 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 SLC7A13Q8TCU3 470 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 EFHD2Q96C19 240 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 LMF1Q96S06 567 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 SPRY4Q9C004 299 aa16.27■□□□□ 0.2
SHKBP1-224ENST00000600718 POFUT2Q9Y2G5 429 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms