RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SLC34A3Q8N130 599 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 OR4C3Q8NH37 302 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 ZNF570Q96NI8 536 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 TRBV11-1A0A0K0K1C0 115 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 ABCD3P28288 659 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 LCN1P31025 176 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 NOVA1P51513 510 aaKnown RBP19.16■□□□□ 0.66
PNKP-203ENST00000593946 FGFBP1Q14512 234 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 EXOC3L2Q2M3D2 409 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 C6orf52Q5T4I8 152 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 ANKRD34AQ69YU3 496 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 KIRREL2Q6UWL6 708 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 PRR22Q8IZ63 422 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 NLGN4XQ8N0W4 816 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 ZNF614Q8N883 585 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 PIK3C3Q8NEB9 887 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 NLGN4YQ8NFZ3 816 aaPredicted RBP19.16■□□□□ 0.66
PNKP-203ENST00000593946 HOXD1Q9GZZ0 328 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 POLR1BQ9H9Y6 1135 aa19.16■□□□□ 0.66
PNKP-203ENST00000593946 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.16■□□□□ 0.66
PNKP-203ENST00000593946 TMEFF2Q9UIK5 374 aaPredicted RBP19.16■□□□□ 0.66
PNKP-203ENST00000593946 FARSAQ9Y285 508 aaKnown RBP19.16■□□□□ 0.66
PNKP-203ENST00000593946 SOCS6O14544 535 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 TSPAN2O60636 221 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 BCAS1O75363 584 aaPredicted RBP19.15■□□□□ 0.66
PNKP-203ENST00000593946 H1F0P07305 194 aaKnown RBP19.15■□□□□ 0.66
PNKP-203ENST00000593946 STAT5AP42229 794 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 RNF144AP50876 292 aaPredicted RBP19.15■□□□□ 0.66
PNKP-203ENST00000593946 RPS18P62269 152 aaKnown RBP19.15■□□□□ 0.66
PNKP-203ENST00000593946 ZSWIM7Q19AV6 140 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 FAHD1Q6P587 224 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 MARCH9Q86YJ5 346 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 CMIPQ8IY22 773 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 NR4A3Q92570 626 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 IMMP1LQ96LU5 166 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 RDH12Q96NR8 316 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 EVA1AQ9H8M9 152 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 UBQLN4Q9NRR5 601 aa19.15■□□□□ 0.66
PNKP-203ENST00000593946 A0A1W2PRQ8 180 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 TMEM200CA6NKL6 621 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 TERTO14746 1132 aaKnown RBP19.14■□□□□ 0.66
PNKP-203ENST00000593946 DENRO43583 198 aaKnown RBP19.14■□□□□ 0.66
PNKP-203ENST00000593946 SNAP29O95721 258 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 DAPP51397 102 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 SMIM11AP58511 58 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 RPS15P62841 145 aaKnown RBP19.14■□□□□ 0.66
PNKP-203ENST00000593946 GABREP78334 506 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 HOXC5Q00444 222 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 PLCXD2Q0VAA5 305 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 DGCR6Q14129 220 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 MICAQ29983 383 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 KLHL26Q53HC5 615 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 KDM4DQ6B0I6 523 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 OFCC1Q8IZS5 231 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 OR11G2Q8NGC1 345 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 ELP5Q8TE02 316 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 GIPC3Q8TF64 312 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 OMA1Q96E52 524 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 ADOQ96SZ5 270 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 PSD2Q9BQI7 771 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 FUZQ9BT04 418 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 LIN28AQ9H9Z2 209 aaKnown RBP19.14■□□□□ 0.66
PNKP-203ENST00000593946 MAN2C1Q9NTJ4 1040 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 FLRT3Q9NZU0 649 aa19.14■□□□□ 0.66
PNKP-203ENST00000593946 C21orf140B9A014 251 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 STMND1H3BQB6 276 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 AP3D1O14617 1153 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 HS6ST1O60243 411 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ABCB7O75027 752 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 REM1O75628 298 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ZFAND5O76080 213 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 UTS2O95399 124 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 THRBP10828 461 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ELAVL4P26378 380 aaKnown RBP19.14■□□□□ 0.65
PNKP-203ENST00000593946 IL12BP29460 328 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 KRT20P35900 424 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 EXT1Q16394 746 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 TAGAPQ8N103 731 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ZNF527Q8NB42 609 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 OR5L2Q8NGL0 311 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ADAMTS14Q8WXS8 1223 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 CNOT9Q92600 299 aaKnown RBP19.14■□□□□ 0.65
PNKP-203ENST00000593946 TFAP2CQ92754 450 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 SLC35B4Q969S0 331 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ALPK1Q96QP1 1244 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 MCHR1Q99705 422 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 ADI1Q9BV57 179 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 FNDC11Q9BVV2 318 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 PRR14Q9BWN1 585 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 GPR87Q9BY21 358 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 FAM117AQ9C073 453 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 Q9H521 79 aa19.14■□□□□ 0.65
PNKP-203ENST00000593946 DNAJB12Q9NXW2 375 aaKnown RBP19.14■□□□□ 0.65
PNKP-203ENST00000593946 TRBV4-1A0A0J9YWV2 114 aa19.13■□□□□ 0.65
PNKP-203ENST00000593946 ARRDC5A6NEK1 342 aa19.13■□□□□ 0.65
PNKP-203ENST00000593946 SERINC4A6NH21 518 aa19.13■□□□□ 0.65
PNKP-203ENST00000593946 SLC30A4O14863 429 aa19.13■□□□□ 0.65
PNKP-203ENST00000593946 RAD1O60671 282 aa19.13■□□□□ 0.65
PNKP-203ENST00000593946 OXSR1O95747 527 aaPredicted RBP19.13■□□□□ 0.65
PNKP-203ENST00000593946 GKN3PP0CG01 181 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms