RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 KIAA0355O15063 1070 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 TO15178 435 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 MRPS14O60783 128 aaKnown RBP9.41□□□□□ -0.9
COL4A6-208ENST00000538570 PRAMEF2O60811 474 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 FABP1P07148 127 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 EPHA1P21709 976 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SOX3P41225 446 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 RAB28P51157 221 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 FXYD4P59646 89 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 STEAP4Q687X5 459 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 KIAA1211LQ6NV74 962 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF619Q8N2I2 560 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SLC5A8Q8N695 610 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ANKK1Q8NFD2 765 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 OR4K5Q8NGD3 323 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 GCDHQ92947 438 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SPTSSAQ969W0 71 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SGCZQ96LD1 299 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 CACNG2Q9Y698 323 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 STYXL1Q9Y6J8 313 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ANKRD26Q9UPS8 1709 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 PFKMP08237 780 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 UPP1Q16831 310 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 COX15Q7KZN9 410 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 IGSF8Q969P0 613 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 OR51J1Q9H342 316 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 HRH3Q9Y5N1 445 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ABCC6O95255 1503 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 FMN2Q9NZ56 1722 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 NPIPA5A0A0B4J1W7 369 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 KRBOX1C9JBD0 128 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 P04436 131 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 CSF1P09603 554 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 WNT4P56705 351 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 MELKQ14680 651 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SPRED3Q2MJR0 410 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 KIAA0895LQ68EN5 471 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 IQCF1Q8N6M8 205 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 OR5W2Q8NH69 310 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SIAEQ9HAT2 523 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-208ENST00000538570 IL37Q9NZH6 218 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 MARCH4Q9P2E8 410 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ENPP4Q9Y6X5 453 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 BMP2P12643 396 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 RAB6AP20340 208 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 PRPS1P60891 318 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 PTPRRQ15256 657 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 VAMP3Q15836 100 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 NKPD1Q17RQ9 610 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 DNAJC22Q8N4W6 341 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SAMD8Q96LT4 415 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF681Q96N22 645 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 MRI1Q9BV20 369 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ALG8Q9BVK2 526 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 KCNJ16Q9NPI9 418 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 A6NCN8 305 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 MPPED1O15442 326 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SEC14L5O43304 696 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PRAF2O60831 178 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SYPP08247 313 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 HTD2P86397 168 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 EIF2B1Q14232 305 aaKnown RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SF3B4Q15427 424 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 CDHR3Q6ZTQ4 885 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM135Q86UB9 458 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 OR52B6Q8NGF0 335 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 OR1S1Q8NH92 325 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 DOK4Q8TEW6 326 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 CA5BP1Q8WTZ4 195 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SORCS1Q8WY21 1168 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 CORO2AQ92828 525 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 MOCOSQ96EN8 888 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 NMNAT1Q9HAN9 279 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PIK3C2AO00443 1686 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 RTCAO00442 366 aaKnown RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 RPS17P08708 135 aaKnown RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 RRAS2P62070 204 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF169Q14929 603 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PLGLAQ15195 96 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 GPR19Q15760 415 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 CYS1Q717R9 158 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 OR4N5Q8IXE1 308 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 NETO1Q8TDF5 533 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 MYLIPQ8WY64 445 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PRR11Q96HE9 360 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 POM121CA8CG34 1229 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PROX2Q3B8N5 592 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 FAM69AQ5T7M9 428 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 EEF1A1P5Q5VTE0 462 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 CNIH2Q6PI25 160 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SFXN5Q8TD22 340 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 PEX11GQ96HA9 241 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 MFFQ9GZY8 342 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 A0A0U1RQK1 487 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1295.1 ms