RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 CAPN13Q6MZZ7 669 aaPredicted RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 NIPAL1Q6NVV3 410 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 ZNF544Q6NX49 715 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 ALKBH5Q6P6C2 394 aaKnown RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 TMEM108Q6UXF1 575 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 RAD9BQ6WBX8 426 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 ADAMTSL5Q6ZMM2 481 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 VN1R4Q7Z5H5 301 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 PHF13Q86YI8 300 aaPredicted RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 ZNF321PQ8N8H1 164 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 MORN4Q8NDC4 146 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 OR4M2Q8NGB6 313 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 OR13C4Q8NGS5 318 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 OR6K3Q8NGY3 331 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 OR14A16Q8NHC5 309 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 HMGCLL1Q8TB92 370 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 FNDC9Q8TBE3 224 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 MTBPQ96DY7 904 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 DHTKD1Q96HY7 919 aaPredicted RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 ALS2CR12Q96Q35 445 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 GAL3ST4Q96RP7 486 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 B9D2Q9BPU9 175 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 FAM118BQ9BPY3 351 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 FSD1LQ9BXM9 530 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 RAB1BQ9H0U4 201 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 STMN4Q9H169 189 aaPredicted RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 GLOD4Q9HC38 313 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 MYNNQ9NPC7 610 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 PLSCR4Q9NRQ2 329 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 PARVAQ9NVD7 372 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 TEX10Q9NXF1 929 aaPredicted RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 TAS2R10Q9NYW0 307 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 TREM2Q9NZC2 230 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 SPATA7Q9P0W8 599 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 KLHL13Q9P2N7 655 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 XPR1Q9UBH6 696 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 MAN1B1Q9UKM7 699 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 PPIEQ9UNP9 301 aaKnown RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 MGAT4BQ9UQ53 548 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 MMACHCQ9Y4U1 282 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 SLC22A7Q9Y694 548 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 CHCHD2Q9Y6H1 151 aaPredicted RBP3.4□□□□□ -1.87
YBX3-205ENST00000536107 IKBKGQ9Y6K9 419 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 SPACA6W5XKT8 324 aa3.4□□□□□ -1.87
YBX3-205ENST00000536107 IGLV3-16A0A075B6K0 115 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 KCNE1BA0A087WTH5 132 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 BICDL2A1A5D9 508 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 C5orf60A6NFR6 353 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 AGAP14A8MT82 685 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 H0YIZ8 118 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 EIF3FO00303 357 aaPredicted RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 HCRTR2O43614 444 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 XPNPEP2O43895 674 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 CEP104O60308 925 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 PRKRAO75569 313 aaKnown RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 REM1O75628 298 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 SMC2O95347 1197 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 NGFP01138 241 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 EPOP01588 193 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 AMY1AP04745 511 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 SFTPBP07988 381 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 FCGR2AP12318 317 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 ANPEPP15144 967 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 FERP16591 822 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 ZNF708P17019 499 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 CHRNB2P17787 502 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 PGCP20142 388 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 TNFRSF1BP20333 461 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 GJC1P36383 396 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 COILP38432 576 aaPredicted RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 NPY2RP49146 381 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 ZNF83P51522 516 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 CLDN18P56856 261 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 FBXW4P57775 412 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 RAB8AP61006 207 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 POU6F2P78424 691 aaPredicted RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 CCZ1BP86790 482 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 CCZ1P86791 482 aaPredicted RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 HOXA4Q00056 320 aaPredicted RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 SPOCK1Q08629 439 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 PNOCQ13519 176 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 PAFAH1B3Q15102 231 aaKnown RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 PON3Q15166 354 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 RPS6KA1Q15418 735 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 FASTKD1Q53R41 847 aaKnown RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 CCDC183Q5T5S1 534 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 GFI1BQ5VTD9 330 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 DCAF12L2Q5VW00 463 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 NCBP2-AS2Q69YL0 99 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 ISM2Q6H9L7 571 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 ZNF549Q6P9A3 640 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 KLHL17Q6TDP4 642 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 TMEM64Q6YI46 380 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 ZNF793Q6ZN11 406 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 Q6ZSR9 355 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 CYP4V2Q6ZWL3 525 aaPredicted RBP3.39□□□□□ -1.87
YBX3-205ENST00000536107 MON1BQ7L1V2 547 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 TAGAPQ8N103 731 aa3.39□□□□□ -1.87
YBX3-205ENST00000536107 SLC15A4Q8N697 577 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms