RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	EMG1	Q92979	244 aa	Known RBP	3.12	□□□□□ -1.91
RDX-208	ENST00000530085	CCT7	Q99832	543 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	SOST	Q9BQB4	213 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	HCAR1	Q9BXC0	346 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	GFRA4	Q9GZZ7	299 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	VCX2	Q9H322	139 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	EXOSC3	Q9NQT5	275 aa	Known RBP	3.12	□□□□□ -1.91
RDX-208	ENST00000530085	IMPAD1	Q9NX62	359 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	ARMCX1	Q9P291	453 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	GNG12	Q9UBI6	72 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	PRODH2	Q9UF12	536 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	KLK13	Q9UKR3	277 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	IKBKG	Q9Y6K9	419 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	ACOD1	A6NK06	481 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	BTN3A3	O00478	584 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	PI15	O43692	258 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ALPI	P09923	528 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	UMPS	P11172	480 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	PGC	P20142	388 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	IDS	P22304	550 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ATP5A1	P25705	553 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ELK3	P41970	407 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ALDH3B2	P48448	385 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	HMGCS2	P54868	508 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	RPL8	P62917	257 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	HMGN5	P82970	282 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	PUDP	Q08623	228 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	PPP1R3A	Q16821	1122 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	MEDAG	Q5VYS4	303 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF57	Q68EA5	555 aa	Predicted RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF600	Q6ZNG1	722 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ACOT1	Q86TX2	421 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	SLC25A42	Q86VD7	318 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	HIPK1	Q86Z02	1210 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF679	Q8IYX0	411 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	EIF1AD	Q8N9N8	165 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	SYT14	Q8NB59	555 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	AEN	Q8WTP8	325 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	TFB1M	Q8WVM0	346 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	FAM3C	Q92520	227 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	SHC3	Q92529	594 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	SDSL	Q96GA7	329 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	PSKH2	Q96QS6	385 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	PUS3	Q9BZE2	481 aa	Known RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	TRIM6	Q9C030	488 aa	Predicted RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	LRRC40	Q9H9A6	602 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	EHF	Q9NZC4	300 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	C6orf203	Q9P0P8	240 aa	Predicted RBP	3.11	□□□□□ -1.91
RDX-208	ENST00000530085	COX16	Q9P0S2	106 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	SENP1	Q9P0U3	644 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	DHRS4-AS1	Q9P1J3	65 aa		3.11	□□□□□ -1.91
RDX-208	ENST00000530085	FER1L5	A0AVI2	2057 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	IGKV3D-15	A0A087WSY6	115 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085		A0A1W2PNV4	684 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	OR6C65	A6NJZ3	312 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	TRIM64C	A6NLI5	447 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	CCT8L1P	A6NM43	557 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	KRTAP9-6	A8MVA2	160 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085		E9PAM4	449 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085		G3V3Y1	287 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SAP18	O00422	153 aa	Known RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ARPC3	O15145	178 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	GPRIN2	O60269	458 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SRPX2	O60687	465 aa	Predicted RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SH3BGRL	O75368	114 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SURF6	O75683	361 aa	Known RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	KBTBD11	O94819	623 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	F10	P00742	488 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	PIGR	P01833	764 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	H2AFZ	P0C0S5	128 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF44	P15621	663 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ACVR1B	P36896	505 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	GNPDA1	P46926	289 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	RIPPLY1	Q0D2K3	151 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	COX10	Q12887	443 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF154	Q13106	437 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	DPYSL3	Q14195	570 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ATF7IP2	Q5U623	682 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	OR8G2P	Q6IF36	304 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	FAM71F2	Q6NXP2	309 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SYT10	Q6XYQ8	523 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	APTX	Q7Z2E3	356 aa	Known RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	CLDN19	Q8N6F1	224 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	MAPK1IP1L	Q8NDC0	245 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ADAMTS16	Q8TE57	1224 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	IL1F10	Q8WWZ1	152 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	ZBED6CL	Q96FA7	236 aa	Predicted RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SH3YL1	Q96HL8	342 aa	Predicted RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	C7orf34	Q96L11	122 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	C12orf66	Q96MD2	445 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	AMDHD1	Q96NU7	426 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	MCCC1	Q96RQ3	725 aa	Predicted RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	RIT2	Q99578	217 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	SLC6A7	Q99884	636 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	EDEM2	Q9BV94	578 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	DUSP16	Q9BY84	665 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	OPN3	Q9H1Y3	402 aa	Predicted RBP	3.1	□□□□□ -1.91
RDX-208	ENST00000530085	VPS33B	Q9H267	617 aa		3.1	□□□□□ -1.91
RDX-208	ENST00000530085	PNN	Q9H307	717 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms