RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 NPIPB9F8W1W9 429 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 AGFG2O95081 481 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 ACTL6AO96019 429 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 TPOP07202 933 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 NR2F1P10589 423 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 HOXB9P17482 250 aaPredicted RBP13.65□□□□□ -0.22
RNF4-210ENST00000508235 DPP4P27487 766 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 GYS2P54840 703 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 KLF10Q13118 480 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 RGNQ15493 299 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 ZNF141Q15928 474 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 MMEL1Q495T6 779 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 GTDC1Q4AE62 458 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 COQ5Q5HYK3 327 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 COX20Q5RI15 118 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 WLSQ5T9L3 541 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 APOOLQ6UXV4 268 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 IFNEQ86WN2 208 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 ZNF619Q8N2I2 560 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 ZNF614Q8N883 585 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 OR2M3Q8NG83 312 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 AURKBQ96GD4 344 aaPredicted RBP13.65□□□□□ -0.22
RNF4-210ENST00000508235 RTN4RQ9BZR6 473 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 SAP130Q9H0E3 1048 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 SLC6A15Q9H2J7 730 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 DSN1Q9H410 356 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 TAS2R10Q9NYW0 307 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 MED11Q9P086 117 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.65□□□□□ -0.22
RNF4-210ENST00000508235 FBXL2Q9UKC9 423 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 ACAD8Q9UKU7 415 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 MKLN1Q9UL63 735 aa13.65□□□□□ -0.22
RNF4-210ENST00000508235 DNAJC13O75165 2243 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 ZNF407Q9C0G0 2248 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 FIGNL2A6NMB9 653 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 FAM47E-STBD1D6RA91 191 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 NPIPA2E9PIF3 369 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 NPIPA3F8WFD2 350 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 GTPBP1O00178 669 aaKnown RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 ADAM10O14672 748 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 KIAA0513O60268 411 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 SNX3O60493 162 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 FCMRO60667 390 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 H6PDO95479 791 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 ESRRAP11474 423 aaPredicted RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 ETFAP13804 333 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 DRD4P21917 467 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 MVDP53602 400 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 CRISP3P54108 245 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 FUT5Q11128 374 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 NFYCQ13952 458 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 UBAP2LQ14157 1087 aaKnown RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 GLYR1Q49A26 553 aaPredicted RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 NHSL2Q5HYW2 709 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 WIPI1Q5MNZ9 446 aaPredicted RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 C1QL3Q5VWW1 255 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 TYW3Q6IPR3 259 aaKnown RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 AAGABQ6PD74 315 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 LRRC74BQ6ZQY2 392 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 FGD2Q7Z6J4 655 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 DHDDSQ86SQ9 333 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 CHERPQ8IWX8 916 aaKnown RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 GATSQ8NAP1 163 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 B4GALNT2Q8NHY0 566 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 PHOSPHO1Q8TCT1 267 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 C1GALT1C1Q96EU7 318 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 TP63Q9H3D4 680 aaPredicted RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 SLC25A37Q9NYZ2 338 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 VAPAQ9P0L0 249 aa13.64□□□□□ -0.23
RNF4-210ENST00000508235 SUCOQ9UBS9 1254 aaKnown RBP13.64□□□□□ -0.23
RNF4-210ENST00000508235 SMG1Q96Q15 3661 aaKnown RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 NBASA2RRP1 2371 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 A0A087WZY1 265 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 TRBV5-3A0A0A0MS03 114 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 NPIPA5A0A0B4J1W7 369 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 CLEC18AA5D8T8 446 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 NPIPA7E9PJI5 369 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 LINC01387J3KSC0 135 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 CCL21O00585 134 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 LRRTM2O43300 516 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 HCRTR2O43614 444 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 NPPAP01160 153 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 HOXD4P09016 255 aaPredicted RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 NPIPA8P0DM63 369 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 BMP2P12643 396 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 GABRA1P14867 456 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 GPX2P18283 190 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 ADH7P40394 386 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 ZNF41P51814 821 aaPredicted RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 SUMO3P55854 103 aaPredicted RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 CYLC2Q14093 348 aaPredicted RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 SF3B4Q15427 424 aaKnown RBP eCLIP13.63□□□□□ -0.232e-8■■■■□ 20.7
RNF4-210ENST00000508235 SYPL1Q16563 259 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 C3AR1Q16581 482 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 GXYLT1Q4G148 440 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 EIPR1Q53HC9 387 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 PDZK1Q5T2W1 519 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 ENPP6Q6UWR7 440 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 CLEC18BQ6UXF7 455 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms