RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 DNAJB13P59910 316 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 GUSBP1Q15486 140 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 EXOC3L2Q2M3D2 409 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 GRAMD1BQ3KR37 738 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 UBAP2Q5T6F2 1119 aaKnown RBP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 NOXRED1Q6NXP6 359 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 ZYG11AQ6WRX3 759 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 SH2D5Q6ZV89 423 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 SSX8Q7RTT4 187 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 ZNF550Q7Z398 422 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 SZRD1Q7Z422 152 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 R3HCC1LQ7Z5L2 792 aaKnown RBP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 KRTAP1-3Q8IUG1 177 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 C17orf53Q8N3J3 647 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 GTPBP8Q8N3Z3 284 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 CEP112Q8N8E3 955 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 CCDC63Q8NA47 563 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 STEAP2Q8NFT2 490 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 ACTRT2Q8TDY3 377 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 SLC9A6Q92581 669 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 PPCDCQ96CD2 204 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 PERPQ96FX8 193 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 MS4A4EQ96PG1 132 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 KCNA7Q96RP8 456 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 CCT7Q99832 543 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 HOXD1Q9GZZ0 328 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 GSTO2Q9H4Y5 243 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 UBQLN4Q9NRR5 601 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 ACSS1Q9NUB1 689 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-214ENST00000495748 C1orf109Q9NX04 203 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 VDAC3Q9Y277 283 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 GPR52Q9Y2T5 361 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 TMED5Q9Y3A6 229 aa6.93□□□□□ -1.3
PTPRK-214ENST00000495748 USF3Q68DE3 2245 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 A0A1W2PQD3 144 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 H3BNH8 94 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 GOLGA8RI6L899 631 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 SCDO00767 359 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ADAMDEC1O15204 470 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 SIAH2O43255 324 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 SS18L1O75177 396 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 NME6O75414 186 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 KRT16P08779 473 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ALOX5P09917 674 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 PAX1P15863 534 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ATP6V1C1P21283 382 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ELK4P28324 431 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 MAPK1P28482 360 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 GCAP28676 217 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 CCKARP32238 428 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 PTH2RP49190 550 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 PRKAG1P54619 331 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 HSPB3Q12988 150 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 RNPS1Q15287 305 aaKnown RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ETFDHQ16134 617 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 TMEM44Q2T9K0 475 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 LRIG3Q6UXM1 1119 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ZNF704Q6ZNC4 412 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 FRMD7Q6ZUT3 714 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 Q71RC1 249 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 MTERF4Q7Z6M4 381 aaKnown RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 TRABD2AQ86V40 505 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 NATD1Q8N6N6 113 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ZNF611Q8N823 705 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 COX18Q8N8Q8 333 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ZNF527Q8NB42 609 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 NOA1Q8NC60 698 aaKnown RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 NUP43Q8NFH3 380 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 OR5M1Q8NGP8 315 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 OR10D3Q8NH80 312 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 OR2V1Q8NHB1 315 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 MTERF3Q96E29 417 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 ARSGQ96EG1 525 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 TRMT61AQ96FX7 289 aaKnown RBP6.92□□□□□ -1.3
PTPRK-214ENST00000495748 SMR3AQ99954 134 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 TRMOQ9BU70 441 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 REEP4Q9H6H4 257 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 L2HGDHQ9H9P8 463 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 LRTM1Q9HBL6 345 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 EQTNQ9NQ60 294 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 SH3BP4Q9P0V3 963 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 NTMQ9P121 344 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 TBK1Q9UHD2 729 aa6.92□□□□□ -1.3
PTPRK-214ENST00000495748 FN1P02751 2386 aaKnown RBP6.91□□□□□ -1.3
PTPRK-214ENST00000495748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.91□□□□□ -1.3
PTPRK-214ENST00000495748 A0A1W2PRB8 838 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 GXYLT2A0PJZ3 443 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 TMEM114B3SHH9 223 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 G3V2L1 256 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 H0YC42 278 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 COPEO14579 308 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 HS3ST1O14792 307 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 AZIN1O14977 448 aa6.91□□□□□ -1.3
PTPRK-214ENST00000495748 CXCL13O43927 109 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms