RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TRAF4Q9BUZ4 470 aaPredicted RBP11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 C6orf106Q9H6K1 298 aaPredicted RBP11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 ACTR10Q9NZ32 417 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 TNFRSF10DQ9UBN6 386 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 MOSPD1Q9UJG1 213 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 ADAM30Q9UKF2 790 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC7A7Q9UM01 511 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 BAIAP2Q9UQB8 552 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 CLCA2Q9UQC9 943 aa11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 YARS2Q9Y2Z4 477 aaKnown RBP11.65□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3DA0A087WVF3 549 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3IA0A087WXS9 549 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3EA0A087X179 549 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 MEIOCA2RUB1 952 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 CDHR4A6H8M9 788 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 FAM172BPA6NC97 362 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 POM121BA6NF01 834 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3LB9A6J9 549 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 CDC42EP2O14613 210 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 PLA2G10O15496 165 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 P2RX6O15547 441 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 PIP5K1CO60331 668 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC19A2O60779 497 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 CTSVO60911 334 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 RCBTB2O95199 551 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 KRT8P05787 483 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3HP0C7X1 549 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 GSTT2P0CG29 244 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 GSTT2BP0CG30 244 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 LAMP2P13473 410 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 HLA-DMAP28067 261 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 CD79BP40259 229 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 GPR4P46093 362 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 GCGRP47871 477 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 EVX1P49640 407 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 SHC2P98077 582 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 DCST2Q5T1A1 773 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 PDZK1Q5T2W1 519 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 RSBN1Q5VWQ0 802 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3CQ6IPX1 549 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TRILQ7L0X0 811 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TBC1D3Q8IZP1 549 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 ACBD7Q8N6N7 88 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 SYT14Q8NB59 555 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC2A12Q8TD20 617 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 CTHRC1Q96CG8 243 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 KCTD12Q96CX2 325 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 ERLEC1Q96DZ1 483 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 AHCYL2Q96HN2 611 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 BMFQ96LC9 184 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 SAMD8Q96LT4 415 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 LRFN5Q96NI6 719 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TIMP4Q99727 224 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TM9SF2Q99805 663 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 ZFYVE21Q9BQ24 234 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 OR52D1Q9H346 318 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 TPK1Q9H3S4 243 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 CMC2Q9NRP2 79 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 SIDT1Q9NXL6 827 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 HAO2Q9NYQ3 351 aa11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 H2AFY2Q9P0M6 372 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-209ENST00000454591 B4DXG7 233 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 SGK494L7N484 410 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 CYR61O00622 381 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 TMCC2O75069 709 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 GPR75O95800 540 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 FAM157BP0CG42 384 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 HTR2AP28223 471 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 MLLT3P42568 568 aaPredicted RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 SOX9P48436 509 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 TGM4P49221 684 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 SNRPNP63162 240 aaKnown RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 MXD1Q05195 221 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 MGAT2Q10469 447 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.63□□□□□ -0.557e-7■□□□□ 8.4
ECHDC1-209ENST00000454591 PRRT3Q5FWE3 981 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 CLEC12AQ5QGZ9 265 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 ATAD3CQ5T2N8 411 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 LCN1P1Q5VSP4 162 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 PARM1Q6UWI2 310 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM91Q6ZNR0 172 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 LHFPL3Q86UP9 236 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 MARCH9Q86YJ5 346 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 LIX1LQ8IVB5 337 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 CPOQ8IVL8 374 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF655Q8N720 491 aaPredicted RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 OR4F15Q8NGB8 312 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 OR52L1Q8NGH7 329 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM239Q8WW34 195 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 SPRYD4Q8WW59 207 aaPredicted RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 FGF14Q92915 247 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 KISS1RQ969F8 398 aaPredicted RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM203Q969S6 136 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 SECISBP2Q96T21 854 aaKnown RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms