RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 MRPS18CQ9Y3D5 142 aaKnown RBP4.48□□□□□ -1.69
SBDSP1-204ENST00000453858 CLCA3PQ9Y6N3 262 aa4.48□□□□□ -1.69
SBDSP1-204ENST00000453858 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CCDC151A5D8V7 595 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TMEM191CA6NGB0 347 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ZNF814B7Z6K7 855 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CCL22O00626 93 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 KLF11O14901 512 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 RGS14O43566 566 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 AVILO75366 819 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CBR3O75828 277 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 INMTO95050 263 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 FTH1P02794 183 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 DHRS4L1P0CG22 281 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 RNH1P13489 461 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ZNF17P17021 662 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 DDX5P17844 614 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ALOX12P18054 663 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ITGALP20701 1170 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 NR4A1P22736 598 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PTAFRP25105 342 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 COILP38432 576 aaPredicted RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PTGDSP41222 190 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ARHGAP25P42331 645 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 RFX3P48380 749 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 IDH3GP51553 393 aaPredicted RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ZNF140P52738 457 aaPredicted RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 HSD17B7P56937 341 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 FBXW4P57775 412 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 RPS15AP62244 130 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ABATP80404 500 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 EGFEM1PQ0D2K5 195 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 HSPA14Q0VDF9 509 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CTBP1Q13363 440 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PON3Q15166 354 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PPA1Q15181 289 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TAF1AQ15573 450 aaPredicted RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 BOLA3Q53S33 107 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 DNAJC24Q6P3W2 148 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PGBD2Q6P3X8 592 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ALKBH5Q6P6C2 394 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 AAGABQ6PD74 315 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CES3Q6UWW8 571 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TMEM64Q6YI46 380 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 GBP6Q6ZN66 633 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 C9orf139Q6ZV77 190 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 USP51Q70EK9 711 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 RNF144BQ7Z419 303 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 GGNQ86UU5 652 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 IFNEQ86WN2 208 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 GAS2L3Q86XJ1 694 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ZNF677Q86XU0 584 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CA13Q8N1Q1 262 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ZCCHC24Q8N2G6 241 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 SLC25A41Q8N5S1 370 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TC2NQ8N9U0 490 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 OR1J4Q8NGS1 313 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 OR14L1PQ8NHC6 308 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 ATG4AQ8WYN0 398 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PMM1Q92871 262 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 DAZLQ92904 295 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PYCR2Q96C36 320 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 FBXO17Q96EF6 278 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 DTNBP1Q96EV8 351 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 GMPPAQ96IJ6 420 aaPredicted RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 FAR2Q96K12 515 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TSG101Q99816 390 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 PINK1Q9BXM7 581 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 GLOD4Q9HC38 313 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TEX10Q9NXF1 929 aaPredicted RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TAS2R16Q9NYV7 291 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TAS2R10Q9NYW0 307 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 GPRC5BQ9NZH0 403 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TAC3Q9UHF0 121 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 CLEC4AQ9UMR7 237 aa4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 REXO2Q9Y3B8 237 aaKnown RBP4.47□□□□□ -1.69
SBDSP1-204ENST00000453858 TRGV11A0A075B6L2 103 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 SRRM5B3KS81 715 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 ERLIN1O75477 346 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 MPZL1O95297 269 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 YEATS4O95619 227 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 AIFM1O95831 613 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 ADAP00813 363 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 ALDOAP04075 364 aaKnown RBP4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 CALB1P05937 261 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 IL32P24001 234 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 PSMA2P25787 234 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 RPA3P35244 121 aaPredicted RBP4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 GCKP35557 465 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 BDKRB1P46663 353 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 UCP3P55916 312 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 MYBPC1Q00872 1141 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 ITGADQ13349 1161 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 EXOC3L4Q17RC7 722 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 KBTBD12Q3ZCT8 623 aa4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 FASTKD1Q53R41 847 aaKnown RBP4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.46□□□□□ -1.7
SBDSP1-204ENST00000453858 TOR1AIP1Q5JTV8 583 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms