RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 WDR54Q9H977 334 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZNF160Q9HCG1 818 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 GBA2Q9HCG7 927 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ABCB9Q9NP78 766 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SERHLQ9NQF3 203 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SIRT7Q9NRC8 400 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ECHDC1Q9NTX5 307 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ACSS1Q9NUB1 689 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 COL20A1Q9P218 1284 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 XPR1Q9UBH6 696 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 LPAR3Q9UBY5 353 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NKX1-2Q9UD57 310 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 KCNJ14Q9UNX9 436 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CDYLQ9Y232 598 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 RBM8AQ9Y5S9 174 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 PTGDR2Q9Y5Y4 395 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CDY1Q9Y6F8 540 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 HSPE1-MOB4S4R3N1 261 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NWD2Q9ULI1 1742 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TNS2Q63HR2 1409 aa4.4□□□□□ -1.7
HMGB3P9-201ENST00000441799 NRXN3Q9Y4C0 1643 aa4.4□□□□□ -1.7
HMGB3P9-201ENST00000441799 A0A1W2PNV4 684 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TBC1D3FA6NER0 549 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 YDJCA8MPS7 323 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 MPTX1A8MV57 137 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 A8MZ25 164 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 RNASEK-C17orf49H0YIS7 233 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 H7C2Y5 167 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 I3L4J1 428 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 M0R296 226 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 WWP2O00308 870 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 DUX1O43812 170 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 FCMRO60667 390 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 MOSPD3O75425 235 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 EIF3GO75821 320 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SCO1O75880 301 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 MATN4O95460 622 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 H6PDO95479 791 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC16A8O95907 504 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CFIP05156 583 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 RHOP08100 348 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 UBCP0CG48 685 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SMIM18P0DKX4 95 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SNHG28P0DPA3 235 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CEACAM1P13688 526 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CTPS1P17812 591 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADRA2CP18825 462 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CD22P20273 847 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 UBA1P22314 1058 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 EDNRBP24530 442 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 FPR3P25089 353 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ELAVL4P26378 380 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 HLA-DMAP28067 261 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PCSK6P29122 969 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TIMP3P35625 211 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 GRIA1P42261 906 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PSMD8P48556 350 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 LHX1P48742 406 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CYB561P49447 251 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACOT2P49753 483 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 KPNA2P52292 529 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PLA2G16P53816 162 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZP1P60852 638 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADARB1P78563 741 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SSBP2P81877 361 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SRSF2Q01130 221 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC34A1Q06495 639 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TDGQ13569 410 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 DNASE1L3Q13609 305 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 DLG2Q15700 870 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 RFX4Q33E94 735 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 AMZ1Q400G9 498 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 C14orf28Q4W4Y0 310 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PABPC1L2AQ5JQF8 200 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 LRIF1Q5T3J3 769 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 N4BP2L1Q5TBK1 243 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 C9orf135Q5VTT2 229 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 C11orf63Q6NUN7 778 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ULK3Q6PHR2 472 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF562Q6V9R5 426 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 Q6ZPB1 254 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CREB3L2Q70SY1 520 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PIGWQ7Z7B1 504 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PEG10Q86TG7 708 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM135Q86UB9 458 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ARHGAP12Q8IWW6 846 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 HS3ST5Q8IZT8 346 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 GPC2Q8N158 579 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PARP8Q8N3A8 854 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 EIF4E3Q8N5X7 224 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM156Q8N614 296 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 EMC1Q8N766 993 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR51D1Q8NGF3 324 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR8J3Q8NGG0 315 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SEMA4DQ92854 862 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 DNASE1L2Q92874 299 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ASB9Q96DX5 294 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZHX1-C8orf76Q96EF9 292 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms