RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CLPXO76031 633 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 WISP2O76076 250 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CELF2O95319 508 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ECDO95905 644 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC16A8O95907 504 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SERPINA3P01011 423 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 APOEP02649 317 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 C1QAP02745 245 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 YES1P07947 543 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 FHP07954 510 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PATE4P0C8F1 98 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 C8orf89P0DMQ9 161 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 AREGP15514 252 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 POLR2EP19388 210 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ITIH1P19827 911 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 BGNP21810 368 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 DRD5P21918 477 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 HRH2P25021 359 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 DCKP27707 260 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SSTR1P30872 391 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 HOXA13P31271 388 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 RPL22P35268 128 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 MAGEA3P43357 314 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 QARSP47897 775 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 LEPRP48357 1165 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC1A6P48664 564 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMBIM6P55061 237 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SSTP61278 116 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ATP6V0D1P61421 351 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PDZK1IP1Q13113 114 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 STX5Q13190 355 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 DPYSL3Q14195 570 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 KRT33BQ14525 404 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 KCNJ11Q14654 390 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SPCS2Q15005 226 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PDK2Q15119 407 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 FCN2Q15485 313 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 MAPRE2Q15555 327 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CHI3L2Q15782 390 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCDC14Q49A88 953 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 NKAIN1Q4KMZ8 207 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 STEAP4Q687X5 459 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 HACD2Q6Y1H2 254 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 EFL1Q7Z2Z2 1120 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ADAMTSL2Q86TH1 951 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRPT1Q86TN4 253 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CARM1Q86X55 608 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CLYBLQ8N0X4 340 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 LSMEM2Q8N112 164 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 DAW1Q8N136 415 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPD1LQ8N335 351 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 GBGT1Q8N5D6 347 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKFN1Q8N957 763 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR52J3Q8NH60 311 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMA8Q8TAA3 256 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PDCD6IPQ8WUM4 868 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SELENOMQ8WWX9 145 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR1E3Q8WZA6 343 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 KIAA1143Q96AT1 154 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ISG20Q96AZ6 181 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASB9Q96DX5 294 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 RMND5BQ96G75 393 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 C16orf58Q96GQ5 468 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 MAGED4Q96JG8 741 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SERAC1Q96JX3 654 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM71F1Q96KD3 344 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 GFI1Q99684 422 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASCL2Q99929 193 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSD2Q9BQI7 771 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CNPY3Q9BT09 278 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 IDI2Q9BXS1 227 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 COA1Q9GZY4 146 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 S1PR5Q9H228 398 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 RPF1Q9H9Y2 349 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 EFCAB1Q9HAE3 211 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 PARVBQ9HBI1 364 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CD209Q9NNX6 404 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 OLAHQ9NV23 265 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARMC1Q9NVT9 282 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM120CQ9NX05 1096 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 NARFQ9UHQ1 456 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 RIMS3Q9UJD0 308 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 KCNK6Q9Y257 313 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CBY1Q9Y3M2 126 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM32AQ9Y421 112 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 QSER1Q2KHR3 1735 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 ABCA3Q99758 1704 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 RGPD3A6NKT7 1758 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 RGPD4Q7Z3J3 1758 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDK5RAP2Q96SN8 1893 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 KIF26BQ2KJY2 2108 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 FUOMA2VDF0 154 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 BTBD17A6NE02 478 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCDC160A6NGH7 325 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 HACD1B0YJ81 288 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRIM49D1C9J1S8 452 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 WRBO00258 174 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 KPNA4O00629 521 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF195O14628 629 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 XPO1O14980 1071 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms