RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ATP6V1E1P36543 226 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 MAP3K8P41279 467 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 PPP3R1P63098 170 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 GPR68Q15743 365 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CRTC2Q53ET0 693 aaPredicted RBP16.81■□□□□ 0.28
CD40-201ENST00000372276 ARMC6Q6NXE6 501 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 PAQR6Q6TCH4 344 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CCBE1Q6UXH8 406 aaPredicted RBP16.81■□□□□ 0.28
CD40-201ENST00000372276 TMPRSS11FQ6ZWK6 438 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 HMGN2P46Q86SG4 172 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 OR8H2Q8N162 312 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CSNK1A1LQ8N752 337 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 ZNF485Q8NCK3 441 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 OR4Q3Q8NH05 313 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CCL4L1Q8NHW4 92 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 TMEM239Q8WW34 195 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 HOXB13Q92826 284 aaPredicted RBP16.81■□□□□ 0.28
CD40-201ENST00000372276 ANKRA2Q9H9E1 313 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 POLMQ9NP87 494 aaPredicted RBP16.81■□□□□ 0.28
CD40-201ENST00000372276 HRASLS2Q9NWW9 162 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 TNFRSF10DQ9UBN6 386 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CDHR4A6H8M9 788 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 C10orf142B7Z368 130 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 SEMA4FO95754 770 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 BLKP51451 505 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 LSM11P83369 360 aaKnown RBP eCLIP16.81■□□□□ 0.28
CD40-201ENST00000372276 OR1Q1Q15612 314 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 TRAM1Q15629 374 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 ZNHIT3Q15649 155 aaPredicted RBP16.81■□□□□ 0.28
CD40-201ENST00000372276 PRICKLE4Q2TBC4 344 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CLEC12AQ5QGZ9 265 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 MZT2AQ6P582 158 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 GDPD3Q7L5L3 318 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 GRAMD2AQ8IUY3 354 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 TMEM255BQ8WV15 326 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 GATAD2BQ8WXI9 593 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 ASB15Q8WXK1 588 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 FAM3CQ92520 227 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CTHRC1Q96CG8 243 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 CCDC3Q9BQI4 270 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 UBQLN3Q9H347 655 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 MOV10Q9HCE1 1003 aaKnown RBP16.81■□□□□ 0.28
CD40-201ENST00000372276 ADAP2Q9NPF8 381 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 ADAM30Q9UKF2 790 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 MMP17Q9ULZ9 603 aa16.81■□□□□ 0.28
CD40-201ENST00000372276 ATG2BQ96BY7 2078 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 TRBV23OR9-2A0A075B6M9 112 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 H0Y8X5 98 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 BRINP1O60477 761 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 NKX2-2O95096 273 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 IGLV3-19P01714 112 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 RBM34P42696 430 aaKnown RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 GPR4P46093 362 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 GCGRP47871 477 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 CTBP2P56545 445 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 MAP4K2Q12851 820 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 TRMT12Q53H54 448 aaKnown RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 C22orf42Q6IC83 251 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 SLC30A6Q6NXT4 461 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 CXXC5Q7LFL8 322 aaKnown RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 LNX2Q8N448 690 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 GPR151Q8TDV0 419 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 LRFN5Q96NI6 719 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 SDHCQ99643 169 aaPredicted RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 PRR14Q9BWN1 585 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 C6orf106Q9H6K1 298 aaPredicted RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 ERVK13-1Q9NX77 482 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 SIDT1Q9NXL6 827 aaKnown RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 MAT2BQ9NZL9 334 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 ZNF223Q9UK11 482 aaPredicted RBP16.8■□□□□ 0.28
CD40-201ENST00000372276 CBLCQ9ULV8 474 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 GPR52Q9Y2T5 361 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 MED31Q9Y3C7 131 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 V9GYH0 126 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 CHD9Q3L8U1 2897 aa16.8■□□□□ 0.28
CD40-201ENST00000372276 LOC105369274A0A096LPK9 316 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 LOC102723532A0A0G2JNH3 316 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 WWP2O00308 870 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 SEC14L5O43304 696 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 DYRK3O43781 588 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 HCN1O60741 890 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 THY1P04216 161 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 DRD5P21918 477 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 PSMD4P55036 377 aaKnown RBP16.79■□□□□ 0.28
CD40-201ENST00000372276 DOC2BQ14184 412 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 GAS6Q14393 721 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 AMZ1Q400G9 498 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 MRPL2Q5T653 305 aaKnown RBP16.79■□□□□ 0.28
CD40-201ENST00000372276 OR2G6Q5TZ20 316 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 DESI1Q6ICB0 168 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 MEPCEQ7L2J0 689 aaKnown RBP16.79■□□□□ 0.28
CD40-201ENST00000372276 BMP8AQ7Z5Y6 402 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 OR4N5Q8IXE1 308 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 OR4N4Q8N0Y3 316 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 ACBD7Q8N6N7 88 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 FANK1Q8TC84 345 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 SLC2A12Q8TD20 617 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 TM9SF4Q92544 642 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms