RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 DNAJA4Q8WW22 397 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CTNNBL1Q8WYA6 563 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RPL3LQ92901 407 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RAD51AP1Q96B01 352 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 OTUB1Q96FW1 271 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 NDUFAF3Q9BU61 184 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RNF41Q9H4P4 317 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 NANOGQ9H9S0 305 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ERVW-1Q9UQF0 538 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RNF6Q9Y252 685 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SH3GLB1Q9Y371 365 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MRPS18CQ9Y3D5 142 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 TAF6LQ9Y6J9 622 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MCM3APO60318 1980 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRSS51A0A1B0GVH4 220 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 HELTA6NFD8 242 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 MPTX1A8MV57 137 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 WISP3O95389 354 aaPredicted RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 EPOP01588 193 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 EBLN1P0CF75 366 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CYP4B1P13584 511 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ALDH3A1P30838 453 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 PTGS2P35354 604 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 RPL5P46777 297 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 GNPDA1P46926 289 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 DCDC1P59894 354 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 BDH1Q02338 343 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 HSF2Q03933 536 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 DNAJC3Q13217 504 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 RUNX2Q13950 521 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 KARSQ15046 597 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRKD1Q15139 912 aaPredicted RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 LETM2Q2VYF4 491 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 TIPARPQ7Z3E1 657 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 MEX3DQ86XN8 651 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 EID3Q8N140 333 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR2V1Q8NHB1 315 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZFP28Q8NHY6 868 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 C8orf46Q8TAG6 207 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SYNPRQ8TBG9 265 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 MMS19Q96T76 1030 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ATG10Q9H0Y0 220 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ROPN1Q9HAT0 212 aaPredicted RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 IL1RAPQ9NPH3 570 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ELF5Q9UKW6 265 aaPredicted RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CDH9Q9ULB4 789 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SCML2Q9UQR0 700 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 STRAPQ9Y3F4 350 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ATG4BQ9Y4P1 393 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 TRBV9A0A0B4J1U6 114 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SPECC1L-ADORA2AF8WAN1 911 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 UPK1AO00322 258 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 HCRTR1O43613 425 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 TYROBPO43914 113 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 HS6ST1O60243 411 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 LYPD3O95274 346 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 C1orf105O95561 183 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 KRT16P08779 473 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 GP9P14770 177 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 FMO4P31512 558 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 HLCSP50747 726 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CTSWP56202 376 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM214AQ32MH5 1076 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 PARP15Q460N3 678 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM76BQ5HYJ3 339 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 RAET1GQ6H3X3 334 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 TMEM65Q6PI78 240 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSSK4Q6SA08 328 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF562Q6V9R5 426 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 MMAAQ8IVH4 418 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 GID4Q8IVV7 300 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SFTPA1Q8IWL2 248 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 C2orf73Q8N5S3 287 aaPredicted RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SYT14Q8NB59 555 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCDC112Q8NEF3 446 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR2AP1Q8NGE2 309 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 HMGCLL1Q8TB92 370 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SMPDL3BQ92485 455 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM89AQ96GI7 184 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 LINC01600Q96MT4 127 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CDCA3Q99618 268 aaPredicted RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 RBM4Q9BWF3 364 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SEMA6AQ9H2E6 1030 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR51M1Q9H341 326 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 WDR54Q9H977 334 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SFXN1Q9H9B4 322 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 FGF21Q9NSA1 209 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 PARVAQ9NVD7 372 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 DMAC2Q9NW81 257 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CA5BQ9Y2D0 317 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 EXOSC1Q9Y3B2 195 aaKnown RBP1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 R4GN57 208 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 FBN3Q75N90 2809 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 CACNA1IQ9P0X4 2223 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ASTN1O14525 1302 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 LRRK1Q38SD2 2015 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 DOCK3Q8IZD9 2030 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 DOCK6Q96HP0 2047 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 ST20-MTHFSA0A0A6YYL1 179 aa1.6□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC22A23A1A5C7 686 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms