RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ARSFP54793 590 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 GINS1Q14691 196 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 OPCMLQ14982 345 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 RPLP0P6Q8NHW5 317 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MTG2Q9H4K7 406 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MROH1Q8NDA8 1641 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PAK4O96013 591 aaPredicted RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 PTHP01270 115 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SERPINA5P05154 406 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 CFHP08603 1231 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SLAMF1Q13291 335 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PRAMEF8Q5VWM4 474 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PRAMEF7Q5VXH5 474 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 ARHGAP11AQ6P4F7 1023 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 OR11L1Q8NGX0 322 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MYLIPQ8WY64 445 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SLC45A3Q96JT2 553 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 AMDHD1Q96NU7 426 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PKP2Q99959 881 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 BARX1Q9HBU1 254 aaPredicted RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 POU2F2P09086 479 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SLURP2P0DP57 97 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MAOAP21397 527 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 RPS18P62269 152 aaKnown RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 CPNE8Q86YQ8 564 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PLXDC1Q8IUK5 500 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 HAVCR2Q8TDQ0 301 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 B4GALT6Q9UBX8 382 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 DIRAS1O95057 198 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 PKLRP30613 574 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 PBX2P40425 430 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 ELAVL3Q14576 367 aaKnown RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 LCTLQ6UWM7 567 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 CARM1Q86X55 608 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 RHBDD1Q8TEB9 315 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SYT17Q9BSW7 474 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 AK6Q9Y3D8 172 aaKnown RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 NUP205Q92621 2012 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 CXorf49A8MYA2 514 aaPredicted RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 FANCGO15287 622 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 ZNF679Q8IYX0 411 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SGK3Q96BR1 496 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 NUDT9Q9BW91 350 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SEMA4CQ9C0C4 833 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 C3P01024 1663 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SDC3O75056 442 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 YIF1AO95070 293 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 CD1CP29017 333 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 PRICKLE2Q7Z3G6 844 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 FAM83FQ8NEG4 500 aaPredicted RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 ABHD11Q8NFV4 315 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 OR8J1Q8NGP2 316 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 FAM71F1Q96KD3 344 aaPredicted RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 P2RY13Q9BPV8 354 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 LMF2Q9BU23 707 aaKnown RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 KCNJ16Q9NPI9 418 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 FBXO7Q9Y3I1 522 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 NUDT21O43809 227 aaKnown RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 TIA1P31483 386 aaKnown RBP eCLIP11.43□□□□□ -0.58
PCF11-201ENST00000298281 FOLR3P41439 243 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 FAM185AQ8N0U4 392 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SCRN2Q96FV2 425 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 RNF170Q96K19 258 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 DNAJB6O75190 326 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 HBQ1P09105 142 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 GDF5P43026 501 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 LRRC25Q8N386 305 aaPredicted RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 C11orf42Q8N5U0 333 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 TMEM185AQ8NFB2 350 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 ITFG2Q969R8 447 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SPEF2Q9C093 1822 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 HNF4GQ14541 408 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 FAM74A1Q5RGS3 127 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 MAMDC2Q7Z304 686 aaPredicted RBP11.43□□□□□ -0.58
PCF11-201ENST00000298281 NUP43Q8NFH3 380 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 OR52E2Q8NGJ4 325 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 OR1E3Q8WZA6 343 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 SFXN2Q96NB2 322 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 HOXD1Q9GZZ0 328 aa11.43□□□□□ -0.58
PCF11-201ENST00000298281 KIAA0355O15063 1070 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 KLF8O95600 359 aaPredicted RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 CELP19835 753 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 MRPL19P49406 292 aaKnown RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 RABGGTBP53611 331 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 BAGE3Q86Y29 109 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 BAGE2Q86Y30 109 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TCTE3Q8IZS6 198 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 SPARTQ8N0X7 666 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 PHOX2BQ99453 314 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 NMES1Q9C002 83 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 STEAP1Q9UHE8 339 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 KLHL21Q9UJP4 597 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 RARRES3Q9UL19 164 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms