RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM2	YKR056W	HNT2	P49775	206 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	GUP1	P53154	560 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	SNP1	Q00916	300 aa	Predicted RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	LCD1	Q04377	747 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	DUS3	Q06053	668 aa	Known RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	RRI2	Q12348	645 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	HMG1	P12683	1054 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	ERS1	P17261	260 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	AEP2	P22136	580 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	CCT5	P40413	562 aa	Known RBP	3.16	□□□□□ -1.9
TRM2	YKR056W	HIS6	P40545	261 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	GZF3	P42944	551 aa	Known RBP	3.16	□□□□□ -1.9
TRM2	YKR056W	NCE103	P53615	221 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	ECM9	Q02202	377 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	YML131W	Q03102	365 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	ATP25	Q03153	612 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	CIA1	Q05583	330 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	SPP382	Q06411	708 aa	Predicted RBP	3.16	□□□□□ -1.9
TRM2	YKR056W	NBA1	Q08229	501 aa	Known RBP	3.16	□□□□□ -1.9
TRM2	YKR056W	PTC5	Q12511	572 aa		3.16	□□□□□ -1.9
TRM2	YKR056W	RPS21A	P0C0V8	87 aa	Known RBP	3.15	□□□□□ -1.9
TRM2	YKR056W	RET1	P22276	1149 aa	Known RBP	3.15	□□□□□ -1.9
TRM2	YKR056W	CDC12	P32468	407 aa	Known RBP	3.15	□□□□□ -1.9
TRM2	YKR056W	SER1	P33330	395 aa	Known RBP	3.15	□□□□□ -1.9
TRM2	YKR056W	YRO2	P38079	344 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	YBR238C	P38330	731 aa	Known RBP	3.15	□□□□□ -1.9
TRM2	YKR056W	HXT6	P39003	570 aa	Known RBP	3.15	□□□□□ -1.9
TRM2	YKR056W	HXT7	P39004	570 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	NEO1	P40527	1151 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	HXT16	P47185	567 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	NPY1	P53164	384 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	MEC3	Q02574	474 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	MLC2	Q06580	163 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	GUD1	Q07729	489 aa		3.15	□□□□□ -1.9
TRM2	YKR056W	HOG1	P32485	435 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	ARL1	P38116	183 aa	Known RBP	3.15	□□□□□ -1.91
TRM2	YKR056W	BIT2	P38346	545 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	NPP2	P39997	493 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	YFL054C	P43549	646 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	MNN11	P46985	422 aa	Known RBP	3.15	□□□□□ -1.91
TRM2	YKR056W	BNA1	P47096	177 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	HRQ1	Q05549	1077 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	ENV7	Q12003	364 aa		3.15	□□□□□ -1.91
TRM2	YKR056W	ADE8	P04161	214 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	GCD1	P09032	578 aa	Predicted RBP	3.14	□□□□□ -1.91
TRM2	YKR056W	CCR4	P31384	837 aa	Known RBP	3.14	□□□□□ -1.91
TRM2	YKR056W	PPH3	P32345	308 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	REC104	P33323	182 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	MFT1	P33441	392 aa	Known RBP	3.14	□□□□□ -1.91
TRM2	YKR056W	TSL1	P38427	1098 aa	Known RBP	3.14	□□□□□ -1.91
TRM2	YKR056W	ERR3	P42222	437 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	QRI7	P43122	407 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	MTC3	P53077	123 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	ESF2	P53743	316 aa	Known RBP	3.14	□□□□□ -1.91
TRM2	YKR056W	MDM1	Q01846	1127 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	ECM38	Q05902	660 aa	Predicted RBP	3.14	□□□□□ -1.91
TRM2	YKR056W	MET7	Q08645	548 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	SSP2	Q08646	371 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	ERP4	Q12450	207 aa		3.14	□□□□□ -1.91
TRM2	YKR056W	PER1	P25625	357 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	KIP1	P28742	1111 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	SSH4	P32343	579 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	MRS6	P32864	603 aa	Known RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	SLA2	P33338	968 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	STO1	P34160	861 aa	Known RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	ACA1	P39970	489 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	TAD1	P53065	400 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	CEG1	Q01159	459 aa	Predicted RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	PHM6	Q05637	104 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	GUP2	Q08929	609 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	ALG6	Q12001	544 aa	Known RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	HSC82	P15108	705 aa	Known RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	ATP12	P22135	325 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	MCM10	P32354	571 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	EMC3	P36039	253 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	YKL133C	P36066	463 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	REI1	P38344	393 aa	Predicted RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	QNS1	P38795	714 aa	Known RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	YAP1801	P38856	637 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	YKE2	P52553	114 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	YGR045C	P53229	120 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	MOT3	P54785	490 aa	Known RBP	3.13	□□□□□ -1.91
TRM2	YKR056W	TRS130	Q03660	1102 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	COG8	Q04632	607 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	PSR2	Q07949	397 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	YDR056C	Q12025	205 aa		3.13	□□□□□ -1.91
TRM2	YKR056W	PTH2	P34222	208 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	RIM4	P38741	713 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	YAR028W	P39548	234 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	LEM3	P42838	414 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	GCV1	P48015	400 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	CDA2	Q06703	312 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	RMP1	Q12530	201 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	RTP1	Q12751	981 aa		3.12	□□□□□ -1.91
TRM2	YKR056W	RPS21B	Q3E754	87 aa	Known RBP	3.12	□□□□□ -1.91
TRM2	YKR056W	COX11	P19516	300 aa	Known RBP	3.11	□□□□□ -1.91
TRM2	YKR056W	DID4	P36108	232 aa		3.11	□□□□□ -1.91
TRM2	YKR056W	FAT1	P38225	669 aa		3.11	□□□□□ -1.91
TRM2	YKR056W	GPB2	P39717	880 aa		3.11	□□□□□ -1.91
TRM2	YKR056W	NDE1	P40215	560 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms