RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W SCS3P53012 380 aa3.94□□□□□ -1.78
PEP8YJL053W SSL1Q04673 461 aaPredicted RBP3.94□□□□□ -1.78
PEP8YJL053W DMC1P25453 334 aa3.93□□□□□ -1.78
PEP8YJL053W CDC12P32468 407 aaKnown RBP3.93□□□□□ -1.78
PEP8YJL053W FKH2P41813 862 aa3.93□□□□□ -1.78
PEP8YJL053W POL32P47110 350 aa3.93□□□□□ -1.78
PEP8YJL053W GYP7P48365 746 aa3.93□□□□□ -1.78
PEP8YJL053W MUP1P50276 574 aa3.93□□□□□ -1.78
PEP8YJL053W RIA1P53893 1110 aa3.93□□□□□ -1.78
PEP8YJL053W ATE1P16639 503 aa3.92□□□□□ -1.78
PEP8YJL053W SPO11P23179 398 aa3.92□□□□□ -1.78
PEP8YJL053W RPP1P38786 293 aa3.92□□□□□ -1.78
PEP8YJL053W SDP1P40479 209 aa3.92□□□□□ -1.78
PEP8YJL053W EEB1Q02891 456 aa3.92□□□□□ -1.78
PEP8YJL053W DUS3Q06053 668 aaKnown RBP3.92□□□□□ -1.78
PEP8YJL053W RRP15Q06511 250 aaPredicted RBP3.92□□□□□ -1.78
PEP8YJL053W CDC48P25694 835 aaKnown RBP3.91□□□□□ -1.78
PEP8YJL053W ORC2P32833 620 aa3.91□□□□□ -1.78
PEP8YJL053W STE13P33894 931 aa3.91□□□□□ -1.78
PEP8YJL053W YJL163CP46996 555 aa3.91□□□□□ -1.78
PEP8YJL053W SNU71P53207 620 aaKnown RBP3.91□□□□□ -1.78
PEP8YJL053W DAM1P53267 343 aa3.91□□□□□ -1.78
PEP8YJL053W CDC34P14682 295 aa3.9□□□□□ -1.79
PEP8YJL053W DUT1P33317 147 aa3.9□□□□□ -1.79
PEP8YJL053W YKR078WP36158 585 aaKnown RBP3.9□□□□□ -1.79
PEP8YJL053W CBR1P38626 284 aaKnown RBP3.9□□□□□ -1.79
PEP8YJL053W YIL108WP40483 696 aaKnown RBP3.9□□□□□ -1.79
PEP8YJL053W FYV10P40492 516 aa3.9□□□□□ -1.79
PEP8YJL053W APM1Q00776 475 aaPredicted RBP3.9□□□□□ -1.79
PEP8YJL053W GAT1P43574 510 aa3.89□□□□□ -1.79
PEP8YJL053W AMA1P50082 593 aa3.89□□□□□ -1.79
PEP8YJL053W TUB3P09734 445 aaKnown RBP3.88□□□□□ -1.79
PEP8YJL053W RPD3P32561 433 aa3.88□□□□□ -1.79
PEP8YJL053W PET112P33893 541 aa3.88□□□□□ -1.79
PEP8YJL053W YJR107WP47145 328 aa3.88□□□□□ -1.79
PEP8YJL053W YGR053CP53234 283 aa3.88□□□□□ -1.79
PEP8YJL053W MRI1Q06489 411 aaKnown RBP3.88□□□□□ -1.79
PEP8YJL053W RFA1P22336 621 aaKnown RBP3.87□□□□□ -1.79
PEP8YJL053W TSL1P38427 1098 aaKnown RBP3.87□□□□□ -1.79
PEP8YJL053W KRI1P42846 591 aaKnown RBP3.87□□□□□ -1.79
PEP8YJL053W NOP7P53261 605 aaKnown RBP3.87□□□□□ -1.79
PEP8YJL053W SSL2Q00578 843 aa3.87□□□□□ -1.79
PEP8YJL053W FBP1P09201 348 aa3.86□□□□□ -1.79
PEP8YJL053W NAP1P25293 417 aaKnown RBP3.86□□□□□ -1.79
PEP8YJL053W PPH3P32345 308 aa3.85□□□□□ -1.79
PEP8YJL053W TYE7P33122 291 aaPredicted RBP3.85□□□□□ -1.79
PEP8YJL053W YBR053CP38235 358 aa3.85□□□□□ -1.79
PEP8YJL053W CTF8P38877 133 aa3.85□□□□□ -1.79
PEP8YJL053W MBP1P39678 833 aa3.85□□□□□ -1.79
PEP8YJL053W CEP3P40969 608 aa3.85□□□□□ -1.79
PEP8YJL053W PKH1Q03407 766 aa3.85□□□□□ -1.79
PEP8YJL053W RMD1Q03441 430 aa3.85□□□□□ -1.79
PEP8YJL053W ESC2Q06340 456 aa3.85□□□□□ -1.79
PEP8YJL053W ABD1P32783 436 aaPredicted RBP3.84□□□□□ -1.79
PEP8YJL053W HIS7P33734 552 aaKnown RBP3.84□□□□□ -1.79
PEP8YJL053W MET10P39692 1035 aa3.84□□□□□ -1.79
PEP8YJL053W MRPS35P53292 345 aa3.84□□□□□ -1.79
PEP8YJL053W SGO1Q08490 590 aa3.84□□□□□ -1.79
PEP8YJL053W CLN2P20438 545 aa3.83□□□□□ -1.8
PEP8YJL053W YJL206CP39529 758 aa3.83□□□□□ -1.8
PEP8YJL053W VHR1P40522 640 aa3.83□□□□□ -1.8
PEP8YJL053W YKE2P52553 114 aa3.83□□□□□ -1.8
PEP8YJL053W PUS2P53167 370 aa3.83□□□□□ -1.8
PEP8YJL053W OYE2Q03558 400 aaKnown RBP3.83□□□□□ -1.8
PEP8YJL053W SVF1Q05515 481 aa3.83□□□□□ -1.8
PEP8YJL053W IRC13Q08630 104 aa3.83□□□□□ -1.8
PEP8YJL053W RPN13O13563 156 aa3.82□□□□□ -1.8
PEP8YJL053W ADE8P04161 214 aa3.82□□□□□ -1.8
PEP8YJL053W NGG1P32494 702 aa3.82□□□□□ -1.8
PEP8YJL053W YHR078WP38799 552 aa3.82□□□□□ -1.8
PEP8YJL053W HSV2P50079 448 aaPredicted RBP3.82□□□□□ -1.8
PEP8YJL053W YDR306CQ06640 478 aa3.82□□□□□ -1.8
PEP8YJL053W PTP1P25044 335 aa3.81□□□□□ -1.8
PEP8YJL053W YBR238CP38330 731 aaKnown RBP3.81□□□□□ -1.8
PEP8YJL053W RIM13Q03792 727 aa3.81□□□□□ -1.8
PEP8YJL053W RPS9AO13516 197 aaKnown RBP3.8□□□□□ -1.8
PEP8YJL053W HOM2P13663 365 aaKnown RBP3.8□□□□□ -1.8
PEP8YJL053W YIR042CP40586 236 aa3.8□□□□□ -1.8
PEP8YJL053W YKR011CQ02209 353 aa3.8□□□□□ -1.8
PEP8YJL053W YUR1P26725 428 aa3.79□□□□□ -1.8
PEP8YJL053W YEL020CP39994 560 aa3.79□□□□□ -1.8
PEP8YJL053W FMP52P40008 231 aa3.79□□□□□ -1.8
PEP8YJL053W TEL2P53038 688 aa3.79□□□□□ -1.8
PEP8YJL053W SEG1Q04279 960 aa3.79□□□□□ -1.8
PEP8YJL053W NPP1P25353 742 aa3.78□□□□□ -1.8
PEP8YJL053W AAR2P32357 355 aaPredicted RBP3.78□□□□□ -1.8
PEP8YJL053W PAM1P37304 830 aaKnown RBP3.78□□□□□ -1.8
PEP8YJL053W YRO2P38079 344 aa3.78□□□□□ -1.8
PEP8YJL053W PZF1P39933 429 aa3.78□□□□□ -1.8
PEP8YJL053W GUS1P46655 708 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
PEP8YJL053W STB2P46679 850 aa3.78□□□□□ -1.8
PEP8YJL053W MNR2P35724 969 aa3.77□□□□□ -1.81
PEP8YJL053W SMX3P54999 86 aaPredicted RBP3.77□□□□□ -1.81
PEP8YJL053W NRG1Q03125 231 aa3.77□□□□□ -1.81
PEP8YJL053W MPH2P0CD99 609 aa3.76□□□□□ -1.81
PEP8YJL053W LAT1P12695 482 aaKnown RBP3.76□□□□□ -1.81
PEP8YJL053W PRP4P20053 465 aaKnown RBP3.76□□□□□ -1.81
PEP8YJL053W VPS34P22543 875 aa3.76□□□□□ -1.81
PEP8YJL053W SBA1P28707 216 aaKnown RBP3.76□□□□□ -1.81
PEP8YJL053W GGA2P38817 585 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms