RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C GUS1P46655 708 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
RTR1YER139C GFA1P14742 717 aaKnown RBP4.4□□□□□ -1.71
RTR1YER139C RIX1P38883 763 aaPredicted RBP4.4□□□□□ -1.71
RTR1YER139C CAF20P12962 161 aaKnown RBP4.39□□□□□ -1.71
RTR1YER139C SBA1P28707 216 aaKnown RBP4.39□□□□□ -1.71
RTR1YER139C AFR1P33304 620 aa4.39□□□□□ -1.71
RTR1YER139C CTF8P38877 133 aa4.39□□□□□ -1.71
RTR1YER139C YIL108WP40483 696 aaKnown RBP4.39□□□□□ -1.71
RTR1YER139C MRPS35P53292 345 aa4.39□□□□□ -1.71
RTR1YER139C SWM1Q12379 170 aa4.39□□□□□ -1.71
RTR1YER139C AGP1P25376 633 aa4.38□□□□□ -1.71
RTR1YER139C PPH3P32345 308 aa4.38□□□□□ -1.71
RTR1YER139C FLO10P36170 1169 aa4.38□□□□□ -1.71
RTR1YER139C FKH2P41813 862 aa4.38□□□□□ -1.71
RTR1YER139C TAH11P47112 604 aa4.38□□□□□ -1.71
RTR1YER139C VPS73P53142 486 aaKnown RBP4.38□□□□□ -1.71
RTR1YER139C VPS30Q02948 557 aa4.38□□□□□ -1.71
RTR1YER139C HOF1Q05080 669 aa4.38□□□□□ -1.71
RTR1YER139C COQ11Q05892 277 aa4.38□□□□□ -1.71
RTR1YER139C YDR306CQ06640 478 aa4.38□□□□□ -1.71
RTR1YER139C TUB1P09733 447 aaKnown RBP4.37□□□□□ -1.71
RTR1YER139C MUP1P50276 574 aa4.37□□□□□ -1.71
RTR1YER139C GDE1Q02979 1223 aa4.37□□□□□ -1.71
RTR1YER139C FAL1Q12099 399 aaKnown RBP4.37□□□□□ -1.71
RTR1YER139C YNL162W-AQ3E7A8 72 aa4.37□□□□□ -1.71
RTR1YER139C HCA4P20448 770 aaKnown RBP4.36□□□□□ -1.71
RTR1YER139C YBR053CP38235 358 aa4.36□□□□□ -1.71
RTR1YER139C RPP1P38786 293 aa4.36□□□□□ -1.71
RTR1YER139C PCL5P38794 229 aa4.36□□□□□ -1.71
RTR1YER139C YAP7Q08182 245 aa4.36□□□□□ -1.71
RTR1YER139C PRP4P20053 465 aaKnown RBP4.35□□□□□ -1.71
RTR1YER139C TYE7P33122 291 aaPredicted RBP4.35□□□□□ -1.71
RTR1YER139C KRI1P42846 591 aaKnown RBP4.35□□□□□ -1.71
RTR1YER139C YJL163CP46996 555 aa4.35□□□□□ -1.71
RTR1YER139C CRR1Q05790 422 aa4.35□□□□□ -1.71
RTR1YER139C MET6P05694 767 aaKnown RBP4.34□□□□□ -1.71
RTR1YER139C HEM3P28789 327 aa4.34□□□□□ -1.71
RTR1YER139C ASF1P32447 279 aa4.34□□□□□ -1.71
RTR1YER139C VBA5P36172 582 aa4.34□□□□□ -1.71
RTR1YER139C ERT1P38140 529 aa4.34□□□□□ -1.71
RTR1YER139C YKR011CQ02209 353 aa4.34□□□□□ -1.71
RTR1YER139C ICT1Q12385 394 aa4.34□□□□□ -1.71
RTR1YER139C KIN3P22209 435 aa4.33□□□□□ -1.72
RTR1YER139C VPS16Q03308 798 aa4.33□□□□□ -1.72
RTR1YER139C CDC43P18898 376 aa4.32□□□□□ -1.72
RTR1YER139C RFA1P22336 621 aaKnown RBP4.32□□□□□ -1.72
RTR1YER139C YRO2P38079 344 aa4.32□□□□□ -1.72
RTR1YER139C YHR078WP38799 552 aa4.32□□□□□ -1.72
RTR1YER139C CEP3P40969 608 aa4.32□□□□□ -1.72
RTR1YER139C ARO10Q06408 635 aa4.32□□□□□ -1.72
RTR1YER139C ADE8P04161 214 aa4.31□□□□□ -1.72
RTR1YER139C ADY2P25613 283 aa4.31□□□□□ -1.72
RTR1YER139C URA1P28272 314 aaPredicted RBP4.31□□□□□ -1.72
RTR1YER139C AAR2P32357 355 aaPredicted RBP4.31□□□□□ -1.72
RTR1YER139C TMT1P32643 299 aa4.31□□□□□ -1.72
RTR1YER139C VHR1P40522 640 aa4.31□□□□□ -1.72
RTR1YER139C RIA1P53893 1110 aa4.31□□□□□ -1.72
RTR1YER139C HDA1P53973 706 aa4.31□□□□□ -1.72
RTR1YER139C THI7Q05998 598 aa4.31□□□□□ -1.72
RTR1YER139C ILV6P25605 309 aaKnown RBP4.3□□□□□ -1.72
RTR1YER139C YKL069WP36088 180 aa4.3□□□□□ -1.72
RTR1YER139C GGA2P38817 585 aaKnown RBP4.3□□□□□ -1.72
RTR1YER139C YIL166CP40445 542 aa4.3□□□□□ -1.72
RTR1YER139C SHE9Q04172 456 aa4.3□□□□□ -1.72
RTR1YER139C IRC13Q08630 104 aa4.3□□□□□ -1.72
RTR1YER139C SIT1P39980 628 aa4.29□□□□□ -1.72
RTR1YER139C ASI2P53895 289 aa4.29□□□□□ -1.72
RTR1YER139C BUL2Q03758 920 aaKnown RBP4.29□□□□□ -1.72
RTR1YER139C AMA1P50082 593 aa4.28□□□□□ -1.72
RTR1YER139C CCM1P48237 864 aaPredicted RBP4.27□□□□□ -1.73
RTR1YER139C PKH1Q03407 766 aa4.27□□□□□ -1.73
RTR1YER139C YML020WQ03722 664 aa4.27□□□□□ -1.73
RTR1YER139C RPS9AO13516 197 aaKnown RBP4.26□□□□□ -1.73
RTR1YER139C PRI2P20457 528 aa4.26□□□□□ -1.73
RTR1YER139C TOK1P40310 691 aa4.26□□□□□ -1.73
RTR1YER139C PUS2P53167 370 aa4.26□□□□□ -1.73
RTR1YER139C OPI10Q08202 246 aa4.26□□□□□ -1.73
RTR1YER139C CBR1P38626 284 aaKnown RBP4.25□□□□□ -1.73
RTR1YER139C YIR042CP40586 236 aa4.25□□□□□ -1.73
RTR1YER139C GLO1P50107 326 aa4.25□□□□□ -1.73
RTR1YER139C TPO2P53283 614 aa4.25□□□□□ -1.73
RTR1YER139C SGO1Q08490 590 aa4.25□□□□□ -1.73
RTR1YER139C DUS1P53759 423 aaKnown RBP4.24□□□□□ -1.73
RTR1YER139C CWC24P53769 259 aa4.24□□□□□ -1.73
RTR1YER139C LCD1Q04377 747 aa4.24□□□□□ -1.73
RTR1YER139C HAL9Q12180 1030 aa4.24□□□□□ -1.73
RTR1YER139C MPH2P0CD99 609 aa4.23□□□□□ -1.73
RTR1YER139C CLN2P20438 545 aa4.23□□□□□ -1.73
RTR1YER139C DMC1P25453 334 aa4.23□□□□□ -1.73
RTR1YER139C REC104P33323 182 aa4.23□□□□□ -1.73
RTR1YER139C FMP52P40008 231 aa4.23□□□□□ -1.73
RTR1YER139C SEC5P89102 971 aa4.23□□□□□ -1.73
RTR1YER139C SSL2Q00578 843 aa4.23□□□□□ -1.73
RTR1YER139C NRG1Q03125 231 aa4.23□□□□□ -1.73
RTR1YER139C MUS81Q04149 632 aaPredicted RBP4.23□□□□□ -1.73
RTR1YER139C ASM4Q05166 528 aa4.23□□□□□ -1.73
RTR1YER139C NOP8Q08287 484 aaPredicted RBP4.23□□□□□ -1.73
RTR1YER139C HBS1P32769 611 aaKnown RBP4.22□□□□□ -1.73
RTR1YER139C HIS7P33734 552 aaKnown RBP4.22□□□□□ -1.73
RTR1YER139C MRP8P35719 219 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms