RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 STE13P33894 931 aa10.63□□□□□ -0.71
NME1NME1 RPN10P38886 268 aaKnown RBP10.63□□□□□ -0.71
NME1NME1 ALY2P47029 1046 aa10.63□□□□□ -0.71
NME1NME1 ENA1P13587 1091 aa10.62□□□□□ -0.71
NME1NME1 SSD1P24276 1250 aaKnown RBP RIP-Chip data10.62□□□□□ -0.71not detected
NME1NME1 HOG1P32485 435 aa10.62□□□□□ -0.71
NME1NME1 TOS1P38288 455 aa10.62□□□□□ -0.71
NME1NME1 MET13P53128 600 aa10.62□□□□□ -0.71
NME1NME1 YGR012WP53206 393 aa10.62□□□□□ -0.71
NME1NME1 ORC3P54790 616 aa10.62□□□□□ -0.71
NME1NME1 ENA2Q01896 1091 aa10.62□□□□□ -0.71
NME1NME1 FAP7Q12055 197 aaPredicted RBP10.62□□□□□ -0.71
NME1NME1 ENA5Q12691 1091 aa10.62□□□□□ -0.71
NME1NME1 CYS3P31373 394 aaKnown RBP10.61□□□□□ -0.71
NME1NME1 YKR073CP36153 106 aa10.61□□□□□ -0.71
NME1NME1 TYS1P36421 394 aaKnown RBP10.61□□□□□ -0.71
NME1NME1 ZRG8P40021 1076 aa10.61□□□□□ -0.71
NME1NME1 CMP2P14747 604 aa10.6□□□□□ -0.71
NME1NME1 TYE7P33122 291 aaPredicted RBP10.6□□□□□ -0.71
NME1NME1 SAP190P36123 1033 aa10.6□□□□□ -0.71
NME1NME1 ALO1P54783 526 aaKnown RBP10.6□□□□□ -0.71
NME1NME1 LRS4Q04087 347 aaKnown RBP10.6□□□□□ -0.71
NME1NME1 HSP78P33416 811 aa10.59□□□□□ -0.71
NME1NME1 RLP7P40693 322 aaKnown RBP10.59□□□□□ -0.71
NME1NME1 PSP2P50109 593 aaKnown RBP10.59□□□□□ -0.71
NME1NME1 HDA1P53973 706 aa10.59□□□□□ -0.71
NME1NME1 YKR011CQ02209 353 aa10.59□□□□□ -0.71
NME1NME1 CDA1Q06702 301 aa10.59□□□□□ -0.71
NME1NME1 GUD1Q07729 489 aa10.59□□□□□ -0.71
NME1NME1 VTS1Q08831 523 aaKnown RBP RIP-Chip data10.59□□□□□ -0.71not detected
NME1NME1 DIF1O13577 133 aa10.58□□□□□ -0.72
NME1NME1 YCL002CP25565 263 aa10.58□□□□□ -0.72
NME1NME1 MRC1P25588 1096 aa10.58□□□□□ -0.72
NME1NME1 SHR5P41912 237 aa10.58□□□□□ -0.72
NME1NME1 PUS2P53167 370 aa10.58□□□□□ -0.72
NME1NME1 CYC1P00044 109 aaPredicted RBP10.57□□□□□ -0.72
NME1NME1 PCM1P38628 557 aaKnown RBP10.57□□□□□ -0.72
NME1NME1 DOT6P40059 670 aaKnown RBP10.57□□□□□ -0.72
NME1NME1 NHX1Q04121 633 aa10.57□□□□□ -0.72
NME1NME1 PAF1P38351 445 aa10.56□□□□□ -0.72
NME1NME1 SET5P38890 526 aaKnown RBP10.56□□□□□ -0.72
NME1NME1 HXT16P47185 567 aa10.56□□□□□ -0.72
NME1NME1 GPG1P53130 126 aa10.56□□□□□ -0.72
NME1NME1 HFD1Q04458 532 aa10.56□□□□□ -0.72
NME1NME1 ATG33Q06485 197 aa10.56□□□□□ -0.72
NME1NME1 GUP2Q08929 609 aa10.56□□□□□ -0.72
NME1NME1 GIN4Q12263 1142 aa10.56□□□□□ -0.72
NME1NME1 PRC1P00729 532 aa10.55□□□□□ -0.72
NME1NME1 YBR182C-AQ8TGU6 64 aa10.55□□□□□ -0.72
NME1NME1 GAL10P04397 699 aa10.54□□□□□ -0.72
NME1NME1 RPD3P32561 433 aa10.54□□□□□ -0.72
NME1NME1 YIL108WP40483 696 aaKnown RBP10.54□□□□□ -0.72
NME1NME1 AIM14P53109 570 aa10.54□□□□□ -0.72
NME1NME1 MTQ2Q03920 221 aaPredicted RBP10.54□□□□□ -0.72
NME1NME1 YOR352WQ08816 343 aa10.54□□□□□ -0.72
NME1NME1 HMG1P12683 1054 aa10.53□□□□□ -0.72
NME1NME1 HSL7P38274 827 aa10.53□□□□□ -0.72
NME1NME1 ETP1P38748 585 aaKnown RBP10.53□□□□□ -0.72
NME1NME1 MND2P40577 368 aa10.53□□□□□ -0.72
NME1NME1 YOR022CQ12204 715 aa10.53□□□□□ -0.72
NME1NME1 TMA17Q12513 150 aa10.53□□□□□ -0.72
NME1NME1 PRP19P32523 503 aaKnown RBP10.52□□□□□ -0.73
NME1NME1 PUB1P32588 453 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
NME1NME1 YJR096WP47137 282 aa10.52□□□□□ -0.73
NME1NME1 ATG19P35193 415 aa10.51□□□□□ -0.73
NME1NME1 CKB2P38930 258 aa10.51□□□□□ -0.73
NME1NME1 FOL1P53848 824 aa10.51□□□□□ -0.73
NME1NME1 BRE4Q07660 1125 aa10.51□□□□□ -0.73
NME1NME1 SPE1P08432 466 aa10.5□□□□□ -0.73
NME1NME1 GPP1P41277 250 aaKnown RBP10.5□□□□□ -0.73
NME1NME1 LSB3P43603 459 aaKnown RBP10.5□□□□□ -0.73
NME1NME1 YJR008WP47085 338 aa10.5□□□□□ -0.73
NME1NME1 SSL1Q04673 461 aaPredicted RBP10.5□□□□□ -0.73
NME1NME1 CRR1Q05790 422 aa10.5□□□□□ -0.73
NME1NME1 LIP5P32875 414 aa10.49□□□□□ -0.73
NME1NME1 POA1P38218 177 aa10.49□□□□□ -0.73
NME1NME1 NPY1P53164 384 aa10.49□□□□□ -0.73
NME1NME1 SNO2P53823 222 aa10.49□□□□□ -0.73
NME1NME1 HAL9Q12180 1030 aa10.49□□□□□ -0.73
NME1NME1 YFL052WP43551 465 aa10.48□□□□□ -0.73
NME1NME1 PBP1P53297 722 aaKnown RBP10.48□□□□□ -0.73
NME1NME1 YDR338CQ05497 695 aa10.48□□□□□ -0.73
NME1NME1 SGD1Q06132 899 aa10.48□□□□□ -0.73
NME1NME1 RPP2AP05319 106 aaKnown RBP10.47□□□□□ -0.73
NME1NME1 GRX7P38068 203 aa10.47□□□□□ -0.73
NME1NME1 DUS1P53759 423 aaKnown RBP10.47□□□□□ -0.73
NME1NME1 UBC9P50623 157 aaPredicted RBP10.46□□□□□ -0.73
NME1NME1 THI21Q08975 551 aa10.46□□□□□ -0.73
NME1NME1 YTM1Q12024 460 aaPredicted RBP10.46□□□□□ -0.73
NME1NME1 CTH1P47976 325 aa10.45□□□□□ -0.74
NME1NME1 ROT1Q03691 256 aa10.45□□□□□ -0.74
NME1NME1 TPO1Q07824 586 aa10.45□□□□□ -0.74
NME1NME1 YDL177CQ12257 170 aa10.45□□□□□ -0.74
NME1NME1 MIH1P23748 554 aa10.44□□□□□ -0.74
NME1NME1 YJR120WP47157 116 aa10.44□□□□□ -0.74
NME1NME1 GTF1P53260 183 aaPredicted RBP10.44□□□□□ -0.74
NME1NME1 TRE2Q08693 809 aa10.44□□□□□ -0.74
NME1NME1 FBP1P09201 348 aa10.43□□□□□ -0.74
NME1NME1 CCR4P31384 837 aaKnown RBP10.43□□□□□ -0.74
NME1NME1 GZF3P42944 551 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms