RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
PHGDH-218ENST00000641491 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
PHGDH-218ENST00000641491 UBTFL1P0CB47 393 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-218ENST00000641491 IRX6P78412 446 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-218ENST00000641491 ST5P78524 1137 aa16.27■□□□□ 0.2
PHGDH-218ENST00000641491 BEND3Q5T5X7 828 aa16.27■□□□□ 0.2
PHGDH-218ENST00000641491 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
PHGDH-218ENST00000641491 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
PHGDH-218ENST00000641491 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
PHGDH-218ENST00000641491 GYS1P13807 737 aa16.26■□□□□ 0.19
PHGDH-218ENST00000641491 CWF19L2Q2TBE0 894 aaKnown RBP16.26■□□□□ 0.19
PHGDH-218ENST00000641491 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
PHGDH-218ENST00000641491 TPTE2Q6XPS3 522 aa16.26■□□□□ 0.19
PHGDH-218ENST00000641491 CEP350Q5VT06 3117 aa16.26■□□□□ 0.19
PHGDH-218ENST00000641491 RNF123Q5XPI4 1314 aa16.25■□□□□ 0.19
PHGDH-218ENST00000641491 AAMPQ13685 434 aa16.25■□□□□ 0.19
PHGDH-218ENST00000641491 FKBP8Q14318 412 aa16.25■□□□□ 0.19
PHGDH-218ENST00000641491 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
PHGDH-218ENST00000641491 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
PHGDH-218ENST00000641491 MYH14Q7Z406 1995 aaKnown RBP16.25■□□□□ 0.19
PHGDH-218ENST00000641491 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
PHGDH-218ENST00000641491 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 GRM8O00222 908 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
PHGDH-218ENST00000641491 GCKRQ14397 625 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
PHGDH-218ENST00000641491 RLBP1P12271 317 aa16.23■□□□□ 0.19
PHGDH-218ENST00000641491 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
PHGDH-218ENST00000641491 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-218ENST00000641491 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
PHGDH-218ENST00000641491 GNAI2P04899 355 aa16.22■□□□□ 0.19
PHGDH-218ENST00000641491 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
PHGDH-218ENST00000641491 MMP10P09238 476 aa16.22■□□□□ 0.19
PHGDH-218ENST00000641491 NFIXQ14938 502 aa16.22■□□□□ 0.19
PHGDH-218ENST00000641491 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-218ENST00000641491 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
PHGDH-218ENST00000641491 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
PHGDH-218ENST00000641491 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-218ENST00000641491 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-218ENST00000641491 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
PHGDH-218ENST00000641491 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
PHGDH-218ENST00000641491 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-218ENST00000641491 SERPINB2P05120 415 aa16.2■□□□□ 0.18
PHGDH-218ENST00000641491 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
PHGDH-218ENST00000641491 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
PHGDH-218ENST00000641491 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
PHGDH-218ENST00000641491 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 GRIN3BO60391 1043 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 HMMRO75330 724 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 MEIS3Q99687 375 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
PHGDH-218ENST00000641491 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
PHGDH-218ENST00000641491 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
PHGDH-218ENST00000641491 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
PHGDH-218ENST00000641491 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
PHGDH-218ENST00000641491 NTSR2O95665 410 aa16.17■□□□□ 0.18
PHGDH-218ENST00000641491 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
PHGDH-218ENST00000641491 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
PHGDH-218ENST00000641491 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-218ENST00000641491 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
PHGDH-218ENST00000641491 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
PHGDH-218ENST00000641491 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-218ENST00000641491 PDE8AO60658 829 aa16.16■□□□□ 0.18
PHGDH-218ENST00000641491 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
PHGDH-218ENST00000641491 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
PHGDH-218ENST00000641491 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
PHGDH-218ENST00000641491 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
PHGDH-218ENST00000641491 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
PHGDH-218ENST00000641491 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
PHGDH-218ENST00000641491 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
PHGDH-218ENST00000641491 H7C1W4 665 aa16.15■□□□□ 0.18
PHGDH-218ENST00000641491 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-218ENST00000641491 TM4SF1P30408 202 aa16.15■□□□□ 0.18
PHGDH-218ENST00000641491 PDE6BP35913 854 aa16.15■□□□□ 0.18
PHGDH-218ENST00000641491 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
PHGDH-218ENST00000641491 JARID2Q92833 1246 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-218ENST00000641491 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-218ENST00000641491 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
PHGDH-218ENST00000641491 ANKRD36CQ5JPF3 1778 aa16.15■□□□□ 0.18
PHGDH-218ENST00000641491 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-218ENST00000641491 DDR1Q08345 913 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 NUP98P52948 1817 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 UTYO14607 1347 aa16.14■□□□□ 0.17
PHGDH-218ENST00000641491 HSPA6P17066 643 aa16.13■□□□□ 0.17
PHGDH-218ENST00000641491 CTSWP56202 376 aa16.13■□□□□ 0.17
PHGDH-218ENST00000641491 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-218ENST00000641491 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
PHGDH-218ENST00000641491 ZBTB40Q9NUA8 1239 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms