RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TTC41PQ6P2S7 1318 aa20.15■□□□□ 0.82
PHGDH-216ENST00000641375 ARXQ96QS3 562 aa20.15■□□□□ 0.82
PHGDH-216ENST00000641375 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
PHGDH-216ENST00000641375 TSHZ3Q63HK5 1081 aa20.15■□□□□ 0.82
PHGDH-216ENST00000641375 RREB1Q92766 1687 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 ERVV-1B6SEH8 477 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 BECN1Q14457 450 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 GPATCH3Q96I76 525 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 NUP98P52948 1817 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 KCNQ2O43526 872 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 FOXO4P98177 505 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 GJD4Q96KN9 370 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-216ENST00000641375 CCDC87Q9NVE4 849 aa20.14■□□□□ 0.81
PHGDH-216ENST00000641375 AK9Q5TCS8 1911 aa20.13■□□□□ 0.81
PHGDH-216ENST00000641375 SASH1O94885 1247 aa20.13■□□□□ 0.81
PHGDH-216ENST00000641375 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
PHGDH-216ENST00000641375 RFX5P48382 616 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-216ENST00000641375 LMBR1LQ6UX01 489 aa20.13■□□□□ 0.81
PHGDH-216ENST00000641375 AFF2P51816 1311 aa20.13■□□□□ 0.81
PHGDH-216ENST00000641375 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
PHGDH-216ENST00000641375 ERC2O15083 957 aa20.12■□□□□ 0.81
PHGDH-216ENST00000641375 PTPN12Q05209 780 aaKnown RBP20.12■□□□□ 0.81
PHGDH-216ENST00000641375 SIL1Q9H173 461 aa20.12■□□□□ 0.81
PHGDH-216ENST00000641375 CRKLP46109 303 aaKnown RBP20.12■□□□□ 0.81
PHGDH-216ENST00000641375 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
PHGDH-216ENST00000641375 PI4K2BQ8TCG2 481 aa20.12■□□□□ 0.81
PHGDH-216ENST00000641375 PCCAP05165 728 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-216ENST00000641375 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
PHGDH-216ENST00000641375 COL5A3P25940 1745 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-216ENST00000641375 GLRX3O76003 335 aaKnown RBP20.11■□□□□ 0.81
PHGDH-216ENST00000641375 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
PHGDH-216ENST00000641375 ZBTB38Q8NAP3 1195 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-216ENST00000641375 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
PHGDH-216ENST00000641375 RILPL2Q969X0 211 aa20.11■□□□□ 0.81
PHGDH-216ENST00000641375 REC8O95072 547 aa20.1■□□□□ 0.81
PHGDH-216ENST00000641375 HLFQ16534 295 aa20.1■□□□□ 0.81
PHGDH-216ENST00000641375 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-216ENST00000641375 AACSQ86V21 672 aa20.1■□□□□ 0.81
PHGDH-216ENST00000641375 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
PHGDH-216ENST00000641375 TRPC5Q9UL62 973 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-216ENST00000641375 ITPK1Q13572 414 aa20.1■□□□□ 0.81
PHGDH-216ENST00000641375 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
PHGDH-216ENST00000641375 ATRNO75882 1429 aa20.09■□□□□ 0.81
PHGDH-216ENST00000641375 NHSQ6T4R5 1651 aa20.09■□□□□ 0.81
PHGDH-216ENST00000641375 PLA2G12BQ9BX93 195 aa20.09■□□□□ 0.81
PHGDH-216ENST00000641375 MYH14Q7Z406 1995 aaKnown RBP20.09■□□□□ 0.81
PHGDH-216ENST00000641375 NLRP10Q86W26 655 aa20.08■□□□□ 0.81
PHGDH-216ENST00000641375 CNTROBQ8N137 903 aa20.08■□□□□ 0.81
PHGDH-216ENST00000641375 ONECUT3O60422 494 aaPredicted RBP20.08■□□□□ 0.8
PHGDH-216ENST00000641375 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.8
PHGDH-216ENST00000641375 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.8
PHGDH-216ENST00000641375 EAF2Q96CJ1 260 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-216ENST00000641375 BTAF1O14981 1849 aa20.07■□□□□ 0.8
PHGDH-216ENST00000641375 FAM89AQ96GI7 184 aa20.06■□□□□ 0.8
PHGDH-216ENST00000641375 CHMLP26374 656 aa20.05■□□□□ 0.8
PHGDH-216ENST00000641375 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
PHGDH-216ENST00000641375 USP26Q9BXU7 913 aa20.05■□□□□ 0.8
PHGDH-216ENST00000641375 MYH3P11055 1940 aa20.05■□□□□ 0.8
PHGDH-216ENST00000641375 GPTP24298 496 aa20.05■□□□□ 0.8
PHGDH-216ENST00000641375 ZNF34Q8IZ26 560 aa20.04■□□□□ 0.8
PHGDH-216ENST00000641375 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
PHGDH-216ENST00000641375 ESYT1Q9BSJ8 1104 aa20.04■□□□□ 0.8
PHGDH-216ENST00000641375 CCDC8Q9H0W5 538 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-216ENST00000641375 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
PHGDH-216ENST00000641375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-216ENST00000641375 IL15P40933 162 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-216ENST00000641375 TFCP2Q12800 502 aa20.03■□□□□ 0.8
PHGDH-216ENST00000641375 TNNI3KQ59H18 835 aa20.03■□□□□ 0.8
PHGDH-216ENST00000641375 SBF2Q86WG5 1849 aa20.03■□□□□ 0.8
PHGDH-216ENST00000641375 TRMT112Q9UI30 125 aaKnown RBP20.03■□□□□ 0.8
PHGDH-216ENST00000641375 FPGT-TNNI3KV9GXZ4 949 aa20.03■□□□□ 0.8
PHGDH-216ENST00000641375 CIAO1O76071 339 aa20.02■□□□□ 0.8
PHGDH-216ENST00000641375 CSF1RP07333 972 aa20.02■□□□□ 0.8
PHGDH-216ENST00000641375 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.8
PHGDH-216ENST00000641375 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 EYA2O00167 538 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 CAMTA2O94983 1202 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 GPR108Q9NPR9 543 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 MAP4K4O95819 1239 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-216ENST00000641375 ATG9AQ7Z3C6 839 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 SEPT12Q8IYM1 358 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 LINC00116Q8NCU8 138 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 EVI5LQ96CN4 794 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 AK7Q96M32 723 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 KIF2CQ99661 725 aa20.01■□□□□ 0.79
PHGDH-216ENST00000641375 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
PHGDH-216ENST00000641375 UBN2Q6ZU65 1347 aa20■□□□□ 0.79
PHGDH-216ENST00000641375 IRS4O14654 1257 aaPredicted RBP20■□□□□ 0.79
PHGDH-216ENST00000641375 EPB41L2O43491 1005 aaKnown RBP20■□□□□ 0.79
PHGDH-216ENST00000641375 PARP10Q53GL7 1025 aa20■□□□□ 0.79
PHGDH-216ENST00000641375 ZNF652Q9Y2D9 606 aa20■□□□□ 0.79
PHGDH-216ENST00000641375 BCORQ6W2J9 1755 aa20■□□□□ 0.79
PHGDH-216ENST00000641375 IFIT5Q13325 482 aaKnown RBP20■□□□□ 0.79
PHGDH-216ENST00000641375 SNX21Q969T3 373 aa20■□□□□ 0.79
PHGDH-216ENST00000641375 TLR7Q9NYK1 1049 aaKnown RBP20■□□□□ 0.79
PHGDH-216ENST00000641375 HSCBQ8IWL3 235 aa19.99■□□□□ 0.79
PHGDH-216ENST00000641375 PDE8AO60658 829 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 CTSWP56202 376 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 RC3H1Q5TC82 1133 aaKnown RBP19.98■□□□□ 0.79
PHGDH-216ENST00000641375 CLEC4GQ6UXB4 293 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms