RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 PGAP2Q9UHJ9 254 aa14.99□□□□□ -0.01
PTP4A1-207ENST00000639568 NIP7Q9Y221 180 aaKnown RBP eCLIP14.99□□□□□ -0.01
PTP4A1-207ENST00000639568 MRC1P22897 1456 aa14.99□□□□□ -0.01
PTP4A1-207ENST00000639568 HEG1Q9ULI3 1381 aa14.98□□□□□ -0.01
PTP4A1-207ENST00000639568 ZNF790Q6PG37 636 aa14.98□□□□□ -0.01
PTP4A1-207ENST00000639568 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
PTP4A1-207ENST00000639568 HDAC9Q9UKV0 1011 aa14.98□□□□□ -0.01
PTP4A1-207ENST00000639568 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
PTP4A1-207ENST00000639568 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 PPIP5K2O43314 1243 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 TEFQ10587 303 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 C2orf69Q8N8R5 385 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 FMNL2Q96PY5 1086 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 SCN11AQ9UI33 1791 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
PTP4A1-207ENST00000639568 FAM155AB1AL88 458 aaPredicted RBP14.96□□□□□ -0.01
PTP4A1-207ENST00000639568 IL13P35225 146 aa14.96□□□□□ -0.01
PTP4A1-207ENST00000639568 USP48Q86UV5 1035 aa14.96□□□□□ -0.01
PTP4A1-207ENST00000639568 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
PTP4A1-207ENST00000639568 MTHFSDQ2M296 383 aaKnown RBP14.95□□□□□ -0.02
PTP4A1-207ENST00000639568 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
PTP4A1-207ENST00000639568 ZNRF3Q9ULT6 936 aa14.95□□□□□ -0.02
PTP4A1-207ENST00000639568 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
PTP4A1-207ENST00000639568 TCERG1O14776 1098 aaKnown RBP14.94□□□□□ -0.02
PTP4A1-207ENST00000639568 HMOX1P09601 288 aa14.94□□□□□ -0.02
PTP4A1-207ENST00000639568 CXCL9Q07325 125 aa14.94□□□□□ -0.02
PTP4A1-207ENST00000639568 AOC3Q16853 763 aa14.94□□□□□ -0.02
PTP4A1-207ENST00000639568 GBA2Q9HCG7 927 aaPredicted RBP14.94□□□□□ -0.02
PTP4A1-207ENST00000639568 COL4A5P29400 1685 aa14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 H7C1D1 291 aa14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 HIRAP54198 1017 aaPredicted RBP14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 TNIP1Q15025 636 aa14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 CRY2Q49AN0 593 aa14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 CSRNP1Q96S65 589 aa14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 VPS33BQ9H267 617 aa14.93□□□□□ -0.02
PTP4A1-207ENST00000639568 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
PTP4A1-207ENST00000639568 NYXQ9GZU5 481 aa14.92□□□□□ -0.02
PTP4A1-207ENST00000639568 BCORQ6W2J9 1755 aa14.92□□□□□ -0.02
PTP4A1-207ENST00000639568 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
PTP4A1-207ENST00000639568 PPEF1O14829 653 aaPredicted RBP14.91□□□□□ -0.02
PTP4A1-207ENST00000639568 KRT26Q7Z3Y9 468 aa14.91□□□□□ -0.02
PTP4A1-207ENST00000639568 TRPM4Q8TD43 1214 aa14.91□□□□□ -0.02
PTP4A1-207ENST00000639568 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
PTP4A1-207ENST00000639568 CNOT7Q9UIV1 285 aaKnown RBP14.91□□□□□ -0.02
PTP4A1-207ENST00000639568 DLL1O00548 723 aa14.9□□□□□ -0.02
PTP4A1-207ENST00000639568 RGL2O15211 777 aa14.9□□□□□ -0.02
PTP4A1-207ENST00000639568 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
PTP4A1-207ENST00000639568 RAD17O75943 681 aa14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 SLC10A3P09131 477 aa14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 HOXA10P31260 410 aaPredicted RBP14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 FBXO46Q6PJ61 603 aaPredicted RBP14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 DLK2Q6UY11 383 aa14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 DCPSQ96C86 337 aaKnown RBP14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 USP16Q9Y5T5 823 aa14.89□□□□□ -0.03
PTP4A1-207ENST00000639568 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
PTP4A1-207ENST00000639568 ZNF296Q8WUU4 475 aaPredicted RBP14.88□□□□□ -0.03
PTP4A1-207ENST00000639568 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
PTP4A1-207ENST00000639568 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
PTP4A1-207ENST00000639568 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
PTP4A1-207ENST00000639568 GNAT3A8MTJ3 354 aa14.87□□□□□ -0.03
PTP4A1-207ENST00000639568 MICALL2Q8IY33 904 aa14.87□□□□□ -0.03
PTP4A1-207ENST00000639568 IL17REQ8NFR9 667 aa14.87□□□□□ -0.03
PTP4A1-207ENST00000639568 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
PTP4A1-207ENST00000639568 TBC1D8O95759 1140 aa14.86□□□□□ -0.03
PTP4A1-207ENST00000639568 PANK3Q9H999 370 aa14.86□□□□□ -0.03
PTP4A1-207ENST00000639568 SNRPA1P09661 255 aaKnown RBP14.85□□□□□ -0.03
PTP4A1-207ENST00000639568 HLFQ16534 295 aa14.85□□□□□ -0.03
PTP4A1-207ENST00000639568 DPP8Q6V1X1 898 aaPredicted RBP14.85□□□□□ -0.03
PTP4A1-207ENST00000639568 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
PTP4A1-207ENST00000639568 ABCC12Q96J65 1359 aa14.85□□□□□ -0.03
PTP4A1-207ENST00000639568 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 ADM5C9JUS6 153 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 KCNQ3O43525 872 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 SAMD7Q7Z3H4 446 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 SLC51AQ86UW1 340 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 SLC17A8Q8NDX2 589 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 GAS2L2Q8NHY3 880 aa14.84□□□□□ -0.03
PTP4A1-207ENST00000639568 RBM26Q5T8P6 1007 aaKnown RBP14.83□□□□□ -0.04
PTP4A1-207ENST00000639568 SULF1Q8IWU6 871 aa14.83□□□□□ -0.04
PTP4A1-207ENST00000639568 RTFDC1Q9BY42 306 aaPredicted RBP14.83□□□□□ -0.04
PTP4A1-207ENST00000639568 MKI67P46013 3256 aaKnown RBP14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 PRAMEF22A3QJZ6 481 aa14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 GPR25O00155 361 aa14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 KIAA2012Q0VF49 1180 aa14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 INTS3Q68E01 1043 aaKnown RBP14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 RASAL3Q86YV0 1011 aa14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 DPF2Q92785 391 aa14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 COLQQ9Y215 455 aaPredicted RBP14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
PTP4A1-207ENST00000639568 NBPF26B4DH59 902 aa14.81□□□□□ -0.04
PTP4A1-207ENST00000639568 DIAPH1O60610 1272 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms