RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 ST18O60284 1047 aa17.66■□□□□ 0.42
CHD1L-211ENST00000639534 PTPN12Q05209 780 aaKnown RBP17.66■□□□□ 0.42
CHD1L-211ENST00000639534 EVI5LQ96CN4 794 aa17.66■□□□□ 0.42
CHD1L-211ENST00000639534 CIZ1Q9ULV3 898 aaPredicted RBP17.66■□□□□ 0.42
CHD1L-211ENST00000639534 PRIM1P49642 420 aaKnown RBP17.65■□□□□ 0.42
CHD1L-211ENST00000639534 FOXO4P98177 505 aa17.65■□□□□ 0.42
CHD1L-211ENST00000639534 NFKBIBQ15653 356 aa17.65■□□□□ 0.42
CHD1L-211ENST00000639534 GIGYF2Q6Y7W6 1299 aaKnown RBP17.65■□□□□ 0.42
CHD1L-211ENST00000639534 UNC5CLQ8IV45 518 aa17.65■□□□□ 0.42
CHD1L-211ENST00000639534 IL17RAQ96F46 866 aa17.65■□□□□ 0.42
CHD1L-211ENST00000639534 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
CHD1L-211ENST00000639534 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
CHD1L-211ENST00000639534 AK9Q5TCS8 1911 aa17.64■□□□□ 0.42
CHD1L-211ENST00000639534 ERVV-1B6SEH8 477 aa17.64■□□□□ 0.41
CHD1L-211ENST00000639534 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-211ENST00000639534 IL6STP40189 918 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-211ENST00000639534 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
CHD1L-211ENST00000639534 SMARCC1Q92922 1105 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-211ENST00000639534 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-211ENST00000639534 SLKQ9H2G2 1235 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-211ENST00000639534 CCDC9Q9Y3X0 531 aaKnown RBP17.64■□□□□ 0.41
CHD1L-211ENST00000639534 MCM2P49736 904 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 VPS72Q15906 364 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 TICAM2Q86XR7 235 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
CHD1L-211ENST00000639534 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 SIL1Q9H173 461 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 ANO2Q9NQ90 1003 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
CHD1L-211ENST00000639534 SGSM2O43147 1006 aa17.62■□□□□ 0.41
CHD1L-211ENST00000639534 CIAO1O76071 339 aa17.62■□□□□ 0.41
CHD1L-211ENST00000639534 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
CHD1L-211ENST00000639534 KIAA1211Q6ZU35 1233 aa17.62■□□□□ 0.41
CHD1L-211ENST00000639534 RAD50Q92878 1312 aa17.62■□□□□ 0.41
CHD1L-211ENST00000639534 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
CHD1L-211ENST00000639534 TNNI3KQ59H18 835 aa17.61■□□□□ 0.41
CHD1L-211ENST00000639534 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
CHD1L-211ENST00000639534 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
CHD1L-211ENST00000639534 FPGT-TNNI3KV9GXZ4 949 aa17.61■□□□□ 0.41
CHD1L-211ENST00000639534 RFX7Q2KHR2 1363 aa17.61■□□□□ 0.41
CHD1L-211ENST00000639534 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
CHD1L-211ENST00000639534 ATP5JP18859 108 aa17.6■□□□□ 0.41
CHD1L-211ENST00000639534 JARID2Q92833 1246 aaPredicted RBP17.6■□□□□ 0.41
CHD1L-211ENST00000639534 SLC4A9Q96Q91 983 aa17.6■□□□□ 0.41
CHD1L-211ENST00000639534 CCDC8Q9H0W5 538 aaPredicted RBP17.6■□□□□ 0.41
CHD1L-211ENST00000639534 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
CHD1L-211ENST00000639534 ZNF330Q9Y3S2 320 aaPredicted RBP17.6■□□□□ 0.41
CHD1L-211ENST00000639534 RREB1Q92766 1687 aa17.6■□□□□ 0.41
CHD1L-211ENST00000639534 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.6■□□□□ 0.41
CHD1L-211ENST00000639534 ANKRD36CQ5JPF3 1778 aa17.6■□□□□ 0.41
CHD1L-211ENST00000639534 TFCP2Q12800 502 aa17.59■□□□□ 0.41
CHD1L-211ENST00000639534 EYA2O00167 538 aa17.58■□□□□ 0.4
CHD1L-211ENST00000639534 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
CHD1L-211ENST00000639534 DDIT3P35638 169 aa17.58■□□□□ 0.4
CHD1L-211ENST00000639534 KLHDC4Q8TBB5 520 aa17.58■□□□□ 0.4
CHD1L-211ENST00000639534 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
CHD1L-211ENST00000639534 CCDC87Q9NVE4 849 aa17.58■□□□□ 0.4
CHD1L-211ENST00000639534 HSPA4P34932 840 aa17.57■□□□□ 0.4
CHD1L-211ENST00000639534 CCDC57Q2TAC2 916 aa17.57■□□□□ 0.4
CHD1L-211ENST00000639534 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
CHD1L-211ENST00000639534 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
CHD1L-211ENST00000639534 AK7Q96M32 723 aa17.57■□□□□ 0.4
CHD1L-211ENST00000639534 ZBTB1Q9Y2K1 713 aa17.57■□□□□ 0.4
CHD1L-211ENST00000639534 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
CHD1L-211ENST00000639534 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
CHD1L-211ENST00000639534 CSF1RP07333 972 aa17.56■□□□□ 0.4
CHD1L-211ENST00000639534 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
CHD1L-211ENST00000639534 SIK1P57059 783 aa17.56■□□□□ 0.4
CHD1L-211ENST00000639534 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
CHD1L-211ENST00000639534 CWC22Q9HCG8 908 aaKnown RBP17.56■□□□□ 0.4
CHD1L-211ENST00000639534 SNRKQ9NRH2 765 aa17.56■□□□□ 0.4
CHD1L-211ENST00000639534 PALLDQ8WX93 1383 aa17.55■□□□□ 0.4
CHD1L-211ENST00000639534 ATP6V1AP38606 617 aa17.55■□□□□ 0.4
CHD1L-211ENST00000639534 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
CHD1L-211ENST00000639534 ATG9AQ7Z3C6 839 aa17.55■□□□□ 0.4
CHD1L-211ENST00000639534 ARXQ96QS3 562 aa17.55■□□□□ 0.4
CHD1L-211ENST00000639534 LSG1Q9H089 658 aaKnown RBP17.55■□□□□ 0.4
CHD1L-211ENST00000639534 AKAP2Q9Y2D5 859 aa17.55■□□□□ 0.4
CHD1L-211ENST00000639534 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
CHD1L-211ENST00000639534 CWC27Q6UX04 472 aaKnown RBP17.54■□□□□ 0.4
CHD1L-211ENST00000639534 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
CHD1L-211ENST00000639534 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
CHD1L-211ENST00000639534 FSD1Q9BTV5 496 aa17.54■□□□□ 0.4
CHD1L-211ENST00000639534 TLR7Q9NYK1 1049 aaKnown RBP17.54■□□□□ 0.4
CHD1L-211ENST00000639534 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
CHD1L-211ENST00000639534 RGL2O15211 777 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 FRAT2O75474 233 aaPredicted RBP17.53■□□□□ 0.4
CHD1L-211ENST00000639534 PTMSP20962 102 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 IFIT5Q13325 482 aaKnown RBP17.53■□□□□ 0.4
CHD1L-211ENST00000639534 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
CHD1L-211ENST00000639534 ZNF34Q8IZ26 560 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
CHD1L-211ENST00000639534 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 HAUS7Q99871 368 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms