RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-207ENST00000639470 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-207ENST00000639470 SNED1Q8TER0 1413 aa21.34■■□□□ 1.01
COLCA2-207ENST00000639470 IBTKQ9P2D0 1353 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-207ENST00000639470 CEP350Q5VT06 3117 aa21.33■■□□□ 1.01
COLCA2-207ENST00000639470 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
COLCA2-207ENST00000639470 NLRP10Q86W26 655 aa21.33■■□□□ 1.01
COLCA2-207ENST00000639470 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
COLCA2-207ENST00000639470 RBM46Q8TBY0 533 aaKnown RBP21.33■■□□□ 1.01
COLCA2-207ENST00000639470 UTP14AQ9BVJ6 771 aaKnown RBP21.33■■□□□ 1.01
COLCA2-207ENST00000639470 FKBP4Q02790 459 aaKnown RBP eCLIP21.32■■□□□ 1
COLCA2-207ENST00000639470 RPGRQ92834 1020 aaKnown RBP21.32■■□□□ 1
COLCA2-207ENST00000639470 ZNF541Q9H0D2 1346 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 COL4A5P29400 1685 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 POTEIP0CG38 1075 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 POTEJP0CG39 1038 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 TCIRG1Q13488 830 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 PARP10Q53GL7 1025 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 PPP1R42Q7Z4L9 355 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 TSPYL6Q8N831 410 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
COLCA2-207ENST00000639470 IFT57Q9NWB7 429 aa21.31■■□□□ 1
COLCA2-207ENST00000639470 RIC1Q4ADV7 1423 aa21.3■■□□□ 1
COLCA2-207ENST00000639470 SOGA3Q5TF21 947 aa21.3■■□□□ 1
COLCA2-207ENST00000639470 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
COLCA2-207ENST00000639470 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
COLCA2-207ENST00000639470 ALDH1B1P30837 517 aa21.29■■□□□ 1
COLCA2-207ENST00000639470 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
COLCA2-207ENST00000639470 MRS2Q9HD23 443 aa21.29■■□□□ 1
COLCA2-207ENST00000639470 HOXB7P09629 217 aa21.28■■□□□ 1
COLCA2-207ENST00000639470 RTL5Q5HYW3 569 aaPredicted RBP21.28■■□□□ 1
COLCA2-207ENST00000639470 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
COLCA2-207ENST00000639470 TRMT112Q9UI30 125 aaKnown RBP21.28■■□□□ 1
COLCA2-207ENST00000639470 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
COLCA2-207ENST00000639470 GNAI1P63096 354 aa21.27■■□□□ 1
COLCA2-207ENST00000639470 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
COLCA2-207ENST00000639470 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
COLCA2-207ENST00000639470 ABCC4O15439 1325 aa21.27■□□□□ 0.99
COLCA2-207ENST00000639470 COL4A1P02462 1669 aa21.26■□□□□ 0.99
COLCA2-207ENST00000639470 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
COLCA2-207ENST00000639470 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
COLCA2-207ENST00000639470 DPY19L2Q6NUT2 758 aa21.26■□□□□ 0.99
COLCA2-207ENST00000639470 ANKRD13DQ6ZTN6 518 aa21.26■□□□□ 0.99
COLCA2-207ENST00000639470 RBM17Q96I25 401 aaKnown RBP21.26■□□□□ 0.99
COLCA2-207ENST00000639470 NLRP3Q96P20 1036 aa21.26■□□□□ 0.99
COLCA2-207ENST00000639470 CRAMP1Q96RY5 1269 aa21.26■□□□□ 0.99
COLCA2-207ENST00000639470 APLP1P51693 650 aa21.25■□□□□ 0.99
COLCA2-207ENST00000639470 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
COLCA2-207ENST00000639470 FAM89AQ96GI7 184 aa21.25■□□□□ 0.99
COLCA2-207ENST00000639470 WDR90Q96KV7 1748 aa21.25■□□□□ 0.99
COLCA2-207ENST00000639470 ISCA1Q9BUE6 129 aa21.25■□□□□ 0.99
COLCA2-207ENST00000639470 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
COLCA2-207ENST00000639470 DICER1Q9UPY3 1922 aaKnown RBP21.24■□□□□ 0.99
COLCA2-207ENST00000639470 ANP32CO43423 234 aa21.24■□□□□ 0.99
COLCA2-207ENST00000639470 FSTL1Q12841 308 aa21.24■□□□□ 0.99
COLCA2-207ENST00000639470 HSP90AB3PQ58FF7 597 aa21.24■□□□□ 0.99
COLCA2-207ENST00000639470 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
COLCA2-207ENST00000639470 JARID2Q92833 1246 aaPredicted RBP21.24■□□□□ 0.99
COLCA2-207ENST00000639470 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
COLCA2-207ENST00000639470 SMC1BQ8NDV3 1235 aa21.23■□□□□ 0.99
COLCA2-207ENST00000639470 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
COLCA2-207ENST00000639470 SH3TC1Q8TE82 1336 aa21.23■□□□□ 0.99
COLCA2-207ENST00000639470 LAMB2P55268 1798 aa21.21■□□□□ 0.99
COLCA2-207ENST00000639470 PSMD1Q99460 953 aa21.21■□□□□ 0.99
COLCA2-207ENST00000639470 FZD9O00144 591 aa21.2■□□□□ 0.98
COLCA2-207ENST00000639470 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
COLCA2-207ENST00000639470 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
COLCA2-207ENST00000639470 MYD88Q99836 296 aa21.2■□□□□ 0.98
COLCA2-207ENST00000639470 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
COLCA2-207ENST00000639470 AOC3Q16853 763 aa21.19■□□□□ 0.98
COLCA2-207ENST00000639470 ATP6V0A2Q9Y487 856 aa21.19■□□□□ 0.98
COLCA2-207ENST00000639470 G2E3Q7L622 706 aa21.18■□□□□ 0.98
COLCA2-207ENST00000639470 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
COLCA2-207ENST00000639470 TAF1DQ9H5J8 278 aaPredicted RBP21.18■□□□□ 0.98
COLCA2-207ENST00000639470 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
COLCA2-207ENST00000639470 TAF1P21675 1872 aa21.18■□□□□ 0.98
COLCA2-207ENST00000639470 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
COLCA2-207ENST00000639470 LARGE2Q8N3Y3 721 aa21.17■□□□□ 0.98
COLCA2-207ENST00000639470 CELF1Q92879 486 aaKnown RBP21.17■□□□□ 0.98
COLCA2-207ENST00000639470 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
COLCA2-207ENST00000639470 GJA3Q9Y6H8 435 aa21.17■□□□□ 0.98
COLCA2-207ENST00000639470 GRAPQ13588 217 aa21.16■□□□□ 0.98
COLCA2-207ENST00000639470 CCDC27Q2M243 656 aa21.16■□□□□ 0.98
COLCA2-207ENST00000639470 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
COLCA2-207ENST00000639470 GRAPLQ8TC17 118 aaPredicted RBP21.16■□□□□ 0.98
COLCA2-207ENST00000639470 IRS4O14654 1257 aaPredicted RBP21.15■□□□□ 0.98
COLCA2-207ENST00000639470 PPIP5K2O43314 1243 aa21.15■□□□□ 0.98
COLCA2-207ENST00000639470 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
COLCA2-207ENST00000639470 DDX46Q7L014 1031 aaKnown RBP21.15■□□□□ 0.98
COLCA2-207ENST00000639470 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
COLCA2-207ENST00000639470 FANCIQ9NVI1 1328 aa21.14■□□□□ 0.97
COLCA2-207ENST00000639470 CCDC30Q5VVM6 783 aa21.14■□□□□ 0.97
COLCA2-207ENST00000639470 JDP2Q8WYK2 163 aa21.14■□□□□ 0.97
COLCA2-207ENST00000639470 CCDC85AQ96PX6 553 aaPredicted RBP21.14■□□□□ 0.97
COLCA2-207ENST00000639470 MAP3K2Q9Y2U5 619 aa21.14■□□□□ 0.97
COLCA2-207ENST00000639470 LTBP1Q14766 1721 aa21.13■□□□□ 0.97
COLCA2-207ENST00000639470 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
COLCA2-207ENST00000639470 TWISTNBQ3B726 338 aaPredicted RBP21.13■□□□□ 0.97
COLCA2-207ENST00000639470 CHADLQ6NUI6 762 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms