RNA–Protein interactions for RNA: ENST00000638314.1

VGLL4-219, Transcript of vestigial like family member 4, human

TSL 5 BASIC

Gene VGLL4, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VGLL4-219	ENST00000638314	SSFA2	P28290	1259 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	IL6ST	P40189	918 aa	Predicted RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	EIF5	P55010	431 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	MFAP1	P55081	439 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	NUCB1	Q02818	461 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	PDIA6	Q15084	440 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	CHD1L	Q86WJ1	897 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	SSH1	Q8WYL5	1049 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	TRIM44	Q96DX7	344 aa	Predicted RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	BCL2L13	Q9BXK5	485 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	API5	Q9BZZ5	524 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	RTN4	Q9NQC3	1192 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	ZBTB40	Q9NUA8	1239 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	DBF4	Q9UBU7	674 aa	Predicted RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	NOB1	Q9ULX3	412 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	RTCB	Q9Y3I0	505 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	DLEC1	Q9Y238	1755 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	SPEF2	Q9C093	1822 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	ADCY9	O60503	1353 aa		4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	BRCA1	P38398	1863 aa	Known RBP	4.9	□□□□□ -1.63
VGLL4-219	ENST00000638314	ATP10D	Q9P241	1426 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	KIAA1551	Q9HCM1	1747 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	GRIN3B	O60391	1043 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	CAMTA2	O94983	1202 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	SEC24B	O95487	1268 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	RLBP1	P12271	317 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	MYL6B	P14649	208 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	HMGB2	P26583	209 aa	Known RBP	4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	POLD1	P28340	1107 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	FLII	Q13045	1269 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	TTLL7	Q6ZT98	887 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	G2E3	Q7L622	706 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	MRPL50	Q8N5N7	158 aa	Known RBP	4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	XAGE3	Q8WTP9	111 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	SGIP1	Q9BQI5	828 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	STK31	Q9BXU1	1019 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	HYPK	Q9NX55	129 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	TFCP2L1	Q9NZI6	479 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	SRP68	Q9UHB9	627 aa	Known RBP	4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	TAF1	P21675	1872 aa		4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	USP42	Q9H9J4	1324 aa	Known RBP	4.89	□□□□□ -1.63
VGLL4-219	ENST00000638314	UTRN	P46939	3433 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314		A0A087WZG4	1122 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	FSD2	A1L4K1	749 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	CDC45	O75419	566 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	NUCB2	P80303	420 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	KIF6	Q6ZMV9	814 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	DZIP3	Q86Y13	1208 aa	Known RBP	4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	COL23A1	Q86Y22	540 aa	Predicted RBP	4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	TMEM57	Q8N5G2	664 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	ARHGEF1	Q92888	912 aa	Known RBP	4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	CHMP4A	Q9BY43	222 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	ZBTB3	Q9H5J0	574 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	PHAX	Q9H814	394 aa	Known RBP	4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	BCL2L12	Q9HB09	334 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	GPBP1L1	Q9HC44	474 aa	Predicted RBP	4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	CWC22	Q9HCG8	908 aa	Known RBP	4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314	MAP3K15	Q6ZN16	1313 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314		A0A1B0GUL6	1792 aa		4.88	□□□□□ -1.63
VGLL4-219	ENST00000638314		K7ELQ4	463 aa	Predicted RBP	4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	RGL2	O15211	777 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	SLC4A2	P04920	1241 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	GYS1	P13807	737 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	HSPA6	P17066	643 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	RFC4	P35249	363 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	CLCN1	P35523	988 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	AIMP1	Q12904	312 aa	Known RBP	4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	FKBP5	Q13451	457 aa	Predicted RBP	4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	RABEP1	Q15276	862 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	HLF	Q16534	295 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	TRAPPC3L	Q5T215	181 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	ANKRD45	Q5TZF3	282 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	USPL1	Q5W0Q7	1092 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	INTS3	Q68E01	1043 aa	Known RBP	4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	COPS6	Q7L5N1	327 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	FLAD1	Q8NFF5	587 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	SLC16A10	Q8TF71	515 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	GRPEL1	Q9HAV7	217 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	NARF	Q9UHQ1	456 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	TBC1D2B	Q9UPU7	963 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	ABCC4	O15439	1325 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	PTPRC	P08575	1304 aa		4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.87	□□□□□ -1.63
VGLL4-219	ENST00000638314	PI4KAP2	A4QPH2	592 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	ERVV-1	B6SEH8	477 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314		F6X3S4	739 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	ST18	O60284	1047 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	ZPR1	O75312	459 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	HMMR	O75330	724 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	REC8	O95072	547 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	DDX58	O95786	925 aa	Known RBP	4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	XRCC6	P12956	609 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	MCM2	P49736	904 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	DDR1	Q08345	913 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	CCDC173	Q0VFZ6	552 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	RAB3GAP1	Q15042	981 aa		4.86	□□□□□ -1.63
VGLL4-219	ENST00000638314	MSL1	Q68DK7	614 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms