RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 TLR7Q9NYK1 1049 aaKnown RBP22.36■■□□□ 1.17
CTSD-212ENST00000637815 HIP1O00291 1037 aa22.36■■□□□ 1.17
CTSD-212ENST00000637815 TTC14Q96N46 770 aa22.36■■□□□ 1.17
CTSD-212ENST00000637815 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 MRE11P49959 708 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 PTPN12Q05209 780 aaKnown RBP22.35■■□□□ 1.17
CTSD-212ENST00000637815 MCTP1Q6DN14 999 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 RASEFQ8IZ41 740 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 SNRKQ9NRH2 765 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 A0A087WZG4 1122 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 ATP5J2-PTCD1G3V325 749 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 PTCD1O75127 700 aaKnown RBP22.35■■□□□ 1.17
CTSD-212ENST00000637815 KCNB2Q92953 911 aa22.35■■□□□ 1.17
CTSD-212ENST00000637815 LMBRD1Q9NUN5 540 aa22.34■■□□□ 1.17
CTSD-212ENST00000637815 BRD1O95696 1058 aa22.33■■□□□ 1.16
CTSD-212ENST00000637815 PTH1RQ03431 593 aa22.33■■□□□ 1.16
CTSD-212ENST00000637815 JARID2Q92833 1246 aaPredicted RBP22.33■■□□□ 1.16
CTSD-212ENST00000637815 DDX49Q9Y6V7 483 aaKnown RBP22.33■■□□□ 1.16
CTSD-212ENST00000637815 NOL8Q76FK4 1167 aaKnown RBP22.32■■□□□ 1.16
CTSD-212ENST00000637815 CCDC171Q6TFL3 1326 aa22.31■■□□□ 1.16
CTSD-212ENST00000637815 H7C1W4 665 aa22.31■■□□□ 1.16
CTSD-212ENST00000637815 GRPEL1Q9HAV7 217 aa22.31■■□□□ 1.16
CTSD-212ENST00000637815 ITGB4P16144 1822 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 TNNI3KQ59H18 835 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 TTLL7Q6ZT98 887 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 TM6SF1Q9BZW5 370 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 STRN4Q9NRL3 753 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 FPGT-TNNI3KV9GXZ4 949 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 NMIQ13287 307 aaPredicted RBP22.3■■□□□ 1.16
CTSD-212ENST00000637815 NECTIN1Q15223 517 aa22.3■■□□□ 1.16
CTSD-212ENST00000637815 DDX54Q8TDD1 881 aaKnown RBP22.3■■□□□ 1.16
CTSD-212ENST00000637815 A1BGP04217 495 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 ATP5JP18859 108 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 EVA1CP58658 441 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 FOXO4P98177 505 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 ARXQ96QS3 562 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 DBNLQ9UJU6 430 aaKnown RBP22.29■■□□□ 1.16
CTSD-212ENST00000637815 MED23Q9ULK4 1368 aa22.29■■□□□ 1.16
CTSD-212ENST00000637815 AK2P54819 239 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 TFCP2Q12800 502 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
CTSD-212ENST00000637815 JCADQ9P266 1359 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 GAS2L3Q86XJ1 694 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 MAP4K1Q92918 833 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 FSD1Q9BTV5 496 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 LIMCH1Q9UPQ0 1083 aa22.28■■□□□ 1.16
CTSD-212ENST00000637815 CASTP20810 708 aaKnown RBP22.27■■□□□ 1.16
CTSD-212ENST00000637815 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.16
CTSD-212ENST00000637815 LMBR1LQ6UX01 489 aa22.27■■□□□ 1.16
CTSD-212ENST00000637815 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
CTSD-212ENST00000637815 PANK2Q9BZ23 570 aa22.27■■□□□ 1.16
CTSD-212ENST00000637815 RFX7Q2KHR2 1363 aa22.27■■□□□ 1.16
CTSD-212ENST00000637815 CCDC191Q8NCU4 936 aa22.26■■□□□ 1.15
CTSD-212ENST00000637815 ZSWIM6Q9HCJ5 1215 aa22.26■■□□□ 1.15
CTSD-212ENST00000637815 TCHHQ07283 1943 aa22.26■■□□□ 1.15
CTSD-212ENST00000637815 A0A0D9SFI3 127 aa22.26■■□□□ 1.15
CTSD-212ENST00000637815 VPS53Q5VIR6 699 aa22.26■■□□□ 1.15
CTSD-212ENST00000637815 RBM8AQ9Y5S9 174 aaKnown RBP22.26■■□□□ 1.15
CTSD-212ENST00000637815 COL14A1Q05707 1796 aaKnown RBP22.26■■□□□ 1.15
CTSD-212ENST00000637815 PLCH1Q4KWH8 1693 aa22.24■■□□□ 1.15
CTSD-212ENST00000637815 PRPF40AO75400 957 aaKnown RBP22.24■■□□□ 1.15
CTSD-212ENST00000637815 ZKSCAN1P17029 563 aaPredicted RBP22.24■■□□□ 1.15
CTSD-212ENST00000637815 ADCK5Q3MIX3 580 aa22.24■■□□□ 1.15
CTSD-212ENST00000637815 CREB3L3Q68CJ9 461 aa22.24■■□□□ 1.15
CTSD-212ENST00000637815 JAKMIP1Q96N16 626 aaKnown RBP22.24■■□□□ 1.15
CTSD-212ENST00000637815 TMOD3Q9NYL9 352 aa22.24■■□□□ 1.15
CTSD-212ENST00000637815 RPAP1Q9BWH6 1393 aaPredicted RBP22.24■■□□□ 1.15
CTSD-212ENST00000637815 WDR33Q9C0J8 1336 aaKnown RBP22.23■■□□□ 1.15
CTSD-212ENST00000637815 ZNF445P59923 1031 aa22.23■■□□□ 1.15
CTSD-212ENST00000637815 ZBTB3Q9H5J0 574 aa22.23■■□□□ 1.15
CTSD-212ENST00000637815 CYP46A1Q9Y6A2 500 aa22.23■■□□□ 1.15
CTSD-212ENST00000637815 ATG9AQ7Z3C6 839 aa22.22■■□□□ 1.15
CTSD-212ENST00000637815 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
CTSD-212ENST00000637815 PDRG1Q9NUG6 133 aa22.22■■□□□ 1.15
CTSD-212ENST00000637815 WNK3Q9BYP7 1800 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 CPA1P15085 419 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 FOXD4L5Q5VV16 416 aaPredicted RBP22.21■■□□□ 1.15
CTSD-212ENST00000637815 VSIG10Q8N0Z9 540 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 FOXD4L4Q8WXT5 416 aaPredicted RBP22.21■■□□□ 1.15
CTSD-212ENST00000637815 HAUS7Q99871 368 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 DBNDD2Q9BQY9 259 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 GPR108Q9NPR9 543 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 RTN4Q9NQC3 1192 aaKnown RBP22.21■■□□□ 1.15
CTSD-212ENST00000637815 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.21■■□□□ 1.15
CTSD-212ENST00000637815 DISP2A7MBM2 1401 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.21■■□□□ 1.15
CTSD-212ENST00000637815 LRP6O75581 1613 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 SLC27A2O14975 620 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 CHAMP1Q96JM3 812 aa22.21■■□□□ 1.15
CTSD-212ENST00000637815 CAVIN1Q6NZI2 390 aaKnown RBP22.2■■□□□ 1.14
CTSD-212ENST00000637815 FAM43AQ8N2R8 423 aa22.2■■□□□ 1.14
CTSD-212ENST00000637815 EDC3Q96F86 508 aaKnown RBP22.2■■□□□ 1.14
CTSD-212ENST00000637815 ZSCAN31Q96LW9 406 aaPredicted RBP22.2■■□□□ 1.14
CTSD-212ENST00000637815 ISCA1Q9BUE6 129 aa22.2■■□□□ 1.14
CTSD-212ENST00000637815 SH2B1Q9NRF2 756 aaPredicted RBP22.2■■□□□ 1.14
CTSD-212ENST00000637815 ATG3Q9NT62 314 aa22.2■■□□□ 1.14
CTSD-212ENST00000637815 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
CTSD-212ENST00000637815 KCNJ4P48050 445 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms