RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NOD1Q9Y239 953 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 PPP2R5DQ14738 602 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 HAUS7Q99871 368 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 JADE2Q9NQC1 790 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 NME9Q86XW9 330 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 RAB34Q9BZG1 259 aa20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 TBCAO75347 108 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 MRRFQ96E11 262 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 PTGS1P23219 599 aa20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 CCDC65Q8IXS2 484 aa20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 ZNF692Q9BU19 519 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 BMS1Q14692 1282 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 ODF2LQ9ULJ1 636 aa20.5■□□□□ 0.87
CACNA1A-227ENST00000636549 FBLN1P23142 703 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 CCDC160A6NGH7 325 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 STX6O43752 255 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 FLIIQ13045 1269 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 HDAC9Q9UKV0 1011 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 TMC6Q7Z403 805 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
CACNA1A-227ENST00000636549 POLD1P28340 1107 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 BEGAINQ9BUH8 593 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 KRT13P13646 458 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 GABPAQ06546 454 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 CABLES1Q8TDN4 633 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 IPO4Q8TEX9 1081 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 ACTN2P35609 894 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 MAEAQ7L5Y9 396 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 ANO3Q9BYT9 981 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 ERBINQ96RT1 1412 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 SHTN1A0MZ66 631 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 CETN1Q12798 172 aa20.48■□□□□ 0.87
CACNA1A-227ENST00000636549 ERCC5P28715 1186 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 RNF34Q969K3 372 aa20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 EIF6P56537 245 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 MFSD6Q6ZSS7 791 aa20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 BAG3O95817 575 aa20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
CACNA1A-227ENST00000636549 FSIP1Q8NA03 581 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 UBXN4Q92575 508 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 GPIHBP1Q8IV16 184 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 GPATCH11Q8N954 259 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 FERMT1Q9BQL6 677 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 PDE4BQ07343 736 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 SMARCC2Q8TAQ2 1214 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 CYP7A1P22680 504 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
CACNA1A-227ENST00000636549 MX1P20591 662 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 KRT32Q14532 448 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 EXOC1Q9NV70 894 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 CLIP2Q9UDT6 1046 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 MVPQ14764 893 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 PARP3Q9Y6F1 533 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 GRPEL1Q9HAV7 217 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 KRT9P35527 623 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 PFDN4Q9NQP4 134 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
CACNA1A-227ENST00000636549 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 HELBQ8NG08 1087 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 USO1O60763 962 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 UBE3BQ7Z3V4 1068 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 MIGA1Q8NAN2 632 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 PPP1R12AO14974 1030 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 RAB11FIP3O75154 756 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 PLCB3Q01970 1234 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 DDX39AO00148 427 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 CHMP2AO43633 222 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 TPD52P55327 224 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 SLC39A6Q13433 755 aa20.44■□□□□ 0.86
CACNA1A-227ENST00000636549 FGFR1OPO95684 399 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 KIF5BP33176 963 aa20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 ALS2CR12Q96Q35 445 aa20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 YEATS4O95619 227 aa20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 TBC1D5Q92609 795 aa20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 KIF1BPQ96EK5 621 aa20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 IFIT1BQ5T764 474 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 PPP1R21Q6ZMI0 780 aa20.43■□□□□ 0.86
CACNA1A-227ENST00000636549 TTF1Q15361 905 aaPredicted RBP20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 GEN1Q17RS7 908 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 TRIM47Q96LD4 638 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 PAFAH1B1P43034 410 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 NCBP1Q09161 790 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 PPP1R42Q7Z4L9 355 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 BACH1O14867 736 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 FAM13AO94988 1023 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 UAP1Q16222 522 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms