RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TAF1DQ9H5J8 278 aaPredicted RBP23.93■■□□□ 1.42
CLN6-214ENST00000636314 ZNF277Q9NRM2 450 aaPredicted RBP23.93■■□□□ 1.42
CLN6-214ENST00000636314 NECTIN2Q92692 538 aa23.92■■□□□ 1.42
CLN6-214ENST00000636314 L3MBTL3Q96JM7 780 aaPredicted RBP23.92■■□□□ 1.42
CLN6-214ENST00000636314 ZNF541Q9H0D2 1346 aa23.91■■□□□ 1.42
CLN6-214ENST00000636314 PDIA6Q15084 440 aa23.91■■□□□ 1.42
CLN6-214ENST00000636314 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
CLN6-214ENST00000636314 OLFM4Q6UX06 510 aa23.91■■□□□ 1.42
CLN6-214ENST00000636314 CNTNAP1P78357 1384 aa23.91■■□□□ 1.42
CLN6-214ENST00000636314 ANXA1P04083 346 aa23.9■■□□□ 1.42
CLN6-214ENST00000636314 PROSER3Q2NL68 480 aa23.9■■□□□ 1.42
CLN6-214ENST00000636314 CLEC11AQ9Y240 323 aa23.9■■□□□ 1.42
CLN6-214ENST00000636314 PASKQ96RG2 1323 aa23.89■■□□□ 1.42
CLN6-214ENST00000636314 KLRG2A4D1S0 409 aaPredicted RBP23.89■■□□□ 1.41
CLN6-214ENST00000636314 HOXB7P09629 217 aa23.89■■□□□ 1.41
CLN6-214ENST00000636314 GTF2E1P29083 439 aaPredicted RBP23.89■■□□□ 1.41
CLN6-214ENST00000636314 LRP10Q7Z4F1 713 aa23.89■■□□□ 1.41
CLN6-214ENST00000636314 RTKN2Q8IZC4 609 aa23.89■■□□□ 1.41
CLN6-214ENST00000636314 MBIPQ9NS73 344 aa23.89■■□□□ 1.41
CLN6-214ENST00000636314 IFT57Q9NWB7 429 aa23.89■■□□□ 1.41
CLN6-214ENST00000636314 ANKRD36CQ5JPF3 1778 aa23.88■■□□□ 1.41
CLN6-214ENST00000636314 HDGFL1Q5TGJ6 251 aa23.88■■□□□ 1.41
CLN6-214ENST00000636314 NYXQ9GZU5 481 aa23.88■■□□□ 1.41
CLN6-214ENST00000636314 HACL1Q9UJ83 578 aa23.88■■□□□ 1.41
CLN6-214ENST00000636314 GPTP24298 496 aa23.87■■□□□ 1.41
CLN6-214ENST00000636314 GNAI1P63096 354 aa23.87■■□□□ 1.41
CLN6-214ENST00000636314 GIGYF2Q6Y7W6 1299 aaKnown RBP23.87■■□□□ 1.41
CLN6-214ENST00000636314 ADAMTSL1Q8N6G6 1762 aa23.87■■□□□ 1.41
CLN6-214ENST00000636314 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
CLN6-214ENST00000636314 TMEM88BA6NKF7 163 aa23.86■■□□□ 1.41
CLN6-214ENST00000636314 ZNF853P0CG23 659 aa23.86■■□□□ 1.41
CLN6-214ENST00000636314 ALDH1B1P30837 517 aa23.86■■□□□ 1.41
CLN6-214ENST00000636314 IARSP41252 1262 aaKnown RBP23.86■■□□□ 1.41
CLN6-214ENST00000636314 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
CLN6-214ENST00000636314 DDX21Q9NR30 783 aaKnown RBP eCLIP23.86■■□□□ 1.41
CLN6-214ENST00000636314 UBN2Q6ZU65 1347 aa23.85■■□□□ 1.41
CLN6-214ENST00000636314 FOXN1O15353 648 aa23.85■■□□□ 1.41
CLN6-214ENST00000636314 EPHX2P34913 555 aa23.85■■□□□ 1.41
CLN6-214ENST00000636314 CHPF2Q9P2E5 772 aa23.85■■□□□ 1.41
CLN6-214ENST00000636314 ABCC12Q96J65 1359 aa23.84■■□□□ 1.41
CLN6-214ENST00000636314 AIMP1Q12904 312 aaKnown RBP23.84■■□□□ 1.41
CLN6-214ENST00000636314 DUSP27Q5VZP5 1158 aa23.84■■□□□ 1.41
CLN6-214ENST00000636314 COPS6Q7L5N1 327 aa23.84■■□□□ 1.41
CLN6-214ENST00000636314 XAGE3Q8WTP9 111 aa23.84■■□□□ 1.41
CLN6-214ENST00000636314 AIDAQ96BJ3 306 aa23.84■■□□□ 1.41
CLN6-214ENST00000636314 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CLN6-214ENST00000636314 ITGBL1O95965 494 aaPredicted RBP23.83■■□□□ 1.41
CLN6-214ENST00000636314 VEGFBP49765 207 aa23.83■■□□□ 1.41
CLN6-214ENST00000636314 NUTM1Q86Y26 1132 aa23.83■■□□□ 1.41
CLN6-214ENST00000636314 ZNF34Q8IZ26 560 aa23.83■■□□□ 1.41
CLN6-214ENST00000636314 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
CLN6-214ENST00000636314 FZD9O00144 591 aa23.81■■□□□ 1.4
CLN6-214ENST00000636314 PARP10Q53GL7 1025 aa23.81■■□□□ 1.4
CLN6-214ENST00000636314 SUSD4Q5VX71 490 aa23.81■■□□□ 1.4
CLN6-214ENST00000636314 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
CLN6-214ENST00000636314 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
CLN6-214ENST00000636314 HSP90AB3PQ58FF7 597 aa23.8■■□□□ 1.4
CLN6-214ENST00000636314 MAP1SQ66K74 1059 aaPredicted RBP23.8■■□□□ 1.4
CLN6-214ENST00000636314 PPP1R42Q7Z4L9 355 aa23.8■■□□□ 1.4
CLN6-214ENST00000636314 PNMA8AQ86V59 439 aaPredicted RBP23.8■■□□□ 1.4
CLN6-214ENST00000636314 JDP2Q8WYK2 163 aa23.8■■□□□ 1.4
CLN6-214ENST00000636314 NTSR2O95665 410 aa23.79■■□□□ 1.4
CLN6-214ENST00000636314 CNTROBQ8N137 903 aa23.79■■□□□ 1.4
CLN6-214ENST00000636314 GPC2Q8N158 579 aa23.79■■□□□ 1.4
CLN6-214ENST00000636314 RPGRQ92834 1020 aaKnown RBP23.79■■□□□ 1.4
CLN6-214ENST00000636314 PSMD1Q99460 953 aa23.79■■□□□ 1.4
CLN6-214ENST00000636314 GJA3Q9Y6H8 435 aa23.79■■□□□ 1.4
CLN6-214ENST00000636314 CTCFP49711 727 aaPredicted RBP23.78■■□□□ 1.4
CLN6-214ENST00000636314 PRDM10Q9NQV6 1147 aa23.78■■□□□ 1.4
CLN6-214ENST00000636314 SNED1Q8TER0 1413 aa23.77■■□□□ 1.4
CLN6-214ENST00000636314 ELL2O00472 640 aaPredicted RBP23.77■■□□□ 1.4
CLN6-214ENST00000636314 EIF6P56537 245 aaKnown RBP23.77■■□□□ 1.4
CLN6-214ENST00000636314 CRY2Q49AN0 593 aa23.77■■□□□ 1.4
CLN6-214ENST00000636314 WWC1Q8IX03 1113 aa23.77■■□□□ 1.4
CLN6-214ENST00000636314 HYPKQ9NX55 129 aa23.77■■□□□ 1.4
CLN6-214ENST00000636314 COL4A5P29400 1685 aa23.76■■□□□ 1.39
CLN6-214ENST00000636314 LTBP1Q14766 1721 aa23.76■■□□□ 1.39
CLN6-214ENST00000636314 CC2D2BQ6DHV5 1058 aa23.76■■□□□ 1.39
CLN6-214ENST00000636314 UTP14AQ9BVJ6 771 aaKnown RBP23.76■■□□□ 1.39
CLN6-214ENST00000636314 LMOD1P29536 600 aaPredicted RBP23.75■■□□□ 1.39
CLN6-214ENST00000636314 DEFB115Q30KQ5 88 aa23.75■■□□□ 1.39
CLN6-214ENST00000636314 PLBD2Q8NHP8 589 aa23.75■■□□□ 1.39
CLN6-214ENST00000636314 TRPM7Q96QT4 1865 aa23.75■■□□□ 1.39
CLN6-214ENST00000636314 TCIRG1Q13488 830 aa23.74■■□□□ 1.39
CLN6-214ENST00000636314 NCBP3Q53F19 620 aaKnown RBP23.74■■□□□ 1.39
CLN6-214ENST00000636314 C8orf58Q8NAV2 365 aa23.74■■□□□ 1.39
CLN6-214ENST00000636314 TSR2Q969E8 191 aaKnown RBP23.74■■□□□ 1.39
CLN6-214ENST00000636314 ABT1Q9ULW3 272 aaKnown RBP23.74■■□□□ 1.39
CLN6-214ENST00000636314 RASSF10A6NK89 507 aa23.73■■□□□ 1.39
CLN6-214ENST00000636314 TCERG1O14776 1098 aaKnown RBP23.73■■□□□ 1.39
CLN6-214ENST00000636314 ANKRD13DQ6ZTN6 518 aa23.73■■□□□ 1.39
CLN6-214ENST00000636314 NLRP10Q86W26 655 aa23.73■■□□□ 1.39
CLN6-214ENST00000636314 LARGE2Q8N3Y3 721 aa23.73■■□□□ 1.39
CLN6-214ENST00000636314 WBP1LQ9NX94 342 aa23.73■■□□□ 1.39
CLN6-214ENST00000636314 LBX1P52954 281 aa23.72■■□□□ 1.39
CLN6-214ENST00000636314 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
CLN6-214ENST00000636314 RBM17Q96I25 401 aaKnown RBP23.72■■□□□ 1.39
CLN6-214ENST00000636314 CHMP4AQ9BY43 222 aa23.72■■□□□ 1.39
CLN6-214ENST00000636314 IL16Q14005 1332 aa23.72■■□□□ 1.39
CLN6-214ENST00000636314 LAMB2P55268 1798 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms