RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-206ENST00000635652 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
PTPN11-206ENST00000635652 TCERG1O14776 1098 aaKnown RBP16.48■□□□□ 0.23
PTPN11-206ENST00000635652 NTSR2O95665 410 aa16.48■□□□□ 0.23
PTPN11-206ENST00000635652 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-206ENST00000635652 COPS6Q7L5N1 327 aa16.48■□□□□ 0.23
PTPN11-206ENST00000635652 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
PTPN11-206ENST00000635652 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
PTPN11-206ENST00000635652 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
PTPN11-206ENST00000635652 CHL1O00533 1208 aa16.47■□□□□ 0.23
PTPN11-206ENST00000635652 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
PTPN11-206ENST00000635652 CC2D2BQ6DHV5 1058 aa16.47■□□□□ 0.23
PTPN11-206ENST00000635652 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
PTPN11-206ENST00000635652 XAGE3Q8WTP9 111 aa16.47■□□□□ 0.23
PTPN11-206ENST00000635652 NLRP3Q96P20 1036 aa16.47■□□□□ 0.23
PTPN11-206ENST00000635652 POTEIP0CG38 1075 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 POTEJP0CG39 1038 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 JDP2Q8WYK2 163 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 PSMD1Q99460 953 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 TMX4Q9H1E5 349 aaPredicted RBP16.46■□□□□ 0.23
PTPN11-206ENST00000635652 SCN4AP35499 1836 aa16.46■□□□□ 0.23
PTPN11-206ENST00000635652 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
PTPN11-206ENST00000635652 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
PTPN11-206ENST00000635652 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
PTPN11-206ENST00000635652 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
PTPN11-206ENST00000635652 L3MBTL3Q96JM7 780 aaPredicted RBP16.45■□□□□ 0.22
PTPN11-206ENST00000635652 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
PTPN11-206ENST00000635652 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
PTPN11-206ENST00000635652 DDX21Q9NR30 783 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN11-206ENST00000635652 FZD9O00144 591 aa16.44■□□□□ 0.22
PTPN11-206ENST00000635652 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
PTPN11-206ENST00000635652 EAPPQ56P03 285 aaPredicted RBP16.44■□□□□ 0.22
PTPN11-206ENST00000635652 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
PTPN11-206ENST00000635652 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
PTPN11-206ENST00000635652 HACL1Q9UJ83 578 aa16.44■□□□□ 0.22
PTPN11-206ENST00000635652 EIF6P56537 245 aaKnown RBP16.43■□□□□ 0.22
PTPN11-206ENST00000635652 TCIRG1Q13488 830 aa16.43■□□□□ 0.22
PTPN11-206ENST00000635652 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
PTPN11-206ENST00000635652 NLRP10Q86W26 655 aa16.43■□□□□ 0.22
PTPN11-206ENST00000635652 LDHDQ86WU2 507 aa16.43■□□□□ 0.22
PTPN11-206ENST00000635652 TRMT112Q9UI30 125 aaKnown RBP16.43■□□□□ 0.22
PTPN11-206ENST00000635652 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
PTPN11-206ENST00000635652 ANKRD36CQ5JPF3 1778 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-206ENST00000635652 GPC2Q8N158 579 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
PTPN11-206ENST00000635652 EPHX2P34913 555 aa16.41■□□□□ 0.22
PTPN11-206ENST00000635652 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
PTPN11-206ENST00000635652 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
PTPN11-206ENST00000635652 APAF1O14727 1248 aa16.4■□□□□ 0.22
PTPN11-206ENST00000635652 HOXB7P09629 217 aa16.4■□□□□ 0.22
PTPN11-206ENST00000635652 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
PTPN11-206ENST00000635652 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
PTPN11-206ENST00000635652 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
PTPN11-206ENST00000635652 ABCC4O15439 1325 aa16.4■□□□□ 0.22
PTPN11-206ENST00000635652 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
PTPN11-206ENST00000635652 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
PTPN11-206ENST00000635652 BBOX1O75936 387 aa16.39■□□□□ 0.21
PTPN11-206ENST00000635652 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
PTPN11-206ENST00000635652 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
PTPN11-206ENST00000635652 PNMA8AQ86V59 439 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-206ENST00000635652 PLBD2Q8NHP8 589 aa16.39■□□□□ 0.21
PTPN11-206ENST00000635652 CREBZFQ9NS37 354 aa16.39■□□□□ 0.21
PTPN11-206ENST00000635652 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-206ENST00000635652 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
PTPN11-206ENST00000635652 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
PTPN11-206ENST00000635652 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
PTPN11-206ENST00000635652 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
PTPN11-206ENST00000635652 LAMB2P55268 1798 aa16.38■□□□□ 0.21
PTPN11-206ENST00000635652 COL4A5P29400 1685 aa16.37■□□□□ 0.21
PTPN11-206ENST00000635652 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
PTPN11-206ENST00000635652 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
PTPN11-206ENST00000635652 AOC3Q16853 763 aa16.37■□□□□ 0.21
PTPN11-206ENST00000635652 TAF1P21675 1872 aa16.36■□□□□ 0.21
PTPN11-206ENST00000635652 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-206ENST00000635652 ITGBL1O95965 494 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-206ENST00000635652 GNAI1P63096 354 aa16.36■□□□□ 0.21
PTPN11-206ENST00000635652 MAP1SQ66K74 1059 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-206ENST00000635652 DPP8Q6V1X1 898 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-206ENST00000635652 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
PTPN11-206ENST00000635652 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
PTPN11-206ENST00000635652 SUPT20HQ8NEM7 779 aa16.36■□□□□ 0.21
PTPN11-206ENST00000635652 PASKQ96RG2 1323 aa16.36■□□□□ 0.21
PTPN11-206ENST00000635652 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
PTPN11-206ENST00000635652 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
PTPN11-206ENST00000635652 GRAPQ13588 217 aa16.35■□□□□ 0.21
PTPN11-206ENST00000635652 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
PTPN11-206ENST00000635652 MPNDQ8N594 471 aa16.35■□□□□ 0.21
PTPN11-206ENST00000635652 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
PTPN11-206ENST00000635652 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
PTPN11-206ENST00000635652 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
PTPN11-206ENST00000635652 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
PTPN11-206ENST00000635652 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms