RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	ZNF408	Q9H9D4	720 aa		10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	C11orf95	C9JLR9	678 aa	Predicted RBP	10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CKAP2L	Q8IYA6	745 aa		10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CNBD1	Q8NA66	436 aa		10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	EVI5L	Q96CN4	794 aa		10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	TSG101	Q99816	390 aa		10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	SLAIN2	Q9P270	581 aa		10	□□□□□ -0.81
SPTAN1-223	ENST00000630866	GSE1	Q14687	1217 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ATP2B3	Q16720	1220 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	TMEM67	Q5HYA8	995 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	NAA16	Q6N069	864 aa	Predicted RBP	9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	BBX	Q8WY36	941 aa	Predicted RBP	9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866		K7ELQ4	463 aa	Predicted RBP	9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCP110	O43303	1012 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	EIF6	P56537	245 aa	Known RBP	9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	C8orf76	Q96K31	380 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	WDR97	A6NE52	1622 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ANKRD62	A6NC57	917 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	TRAPPC8	Q9Y2L5	1435 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ZNF710	Q8N1W2	664 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	TSPY26P	Q9H489	355 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	MAP3K1	Q13233	1512 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	DISP3	Q9P2K9	1392 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ATP10A	O60312	1499 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ABCC2	Q92887	1545 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866		H0YIN7	160 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCDC192	P0DO97	292 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	SEPT7	Q16181	437 aa	Known RBP	9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	INCENP	Q9NQS7	918 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ECHDC1	Q9NTX5	307 aa		9.99	□□□□□ -0.81
SPTAN1-223	ENST00000630866	RXRB	P28702	533 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	IL27	Q8NEV9	243 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ANKRD2	Q9GZV1	360 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	MBIP	Q9NS73	344 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	FLT4	P35916	1363 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	EIF5	P55010	431 aa	Known RBP	9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	SKIDA1	Q1XH10	827 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	RARS	P54136	660 aa	Known RBP	9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCDC178	Q5BJE1	867 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	GOLGA6L7	A0A1B0GV03	622 aa		9.98	□□□□□ -0.81
SPTAN1-223	ENST00000630866	PLCG2	P16885	1265 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CBFA2T2	O43439	604 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CETN2	P41208	172 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	IRS4	O14654	1257 aa	Predicted RBP	9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	EZR	P15311	586 aa	Known RBP	9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	TTC16	Q8NEE8	873 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCDC87	Q9NVE4	849 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ABCC1	P33527	1531 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCDC66	A2RUB6	948 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	KIF20A	O95235	890 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ZMYND15	Q9H091	742 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	GRM8	O00222	908 aa		9.97	□□□□□ -0.81
SPTAN1-223	ENST00000630866	EIF4A2	Q14240	407 aa	Known RBP	9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	ZNF397	Q8NF99	534 aa	Predicted RBP	9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CALML4	Q96GE6	196 aa		9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCDC83	Q8IWF9	413 aa		9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	TCP11L1	Q9NUJ3	509 aa		9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	NKTR	P30414	1462 aa	Known RBP	9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	FGFR1OP	O95684	399 aa	Known RBP	9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	LMBR1L	Q6UX01	489 aa		9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	STXBP4	Q6ZWJ1	553 aa		9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	CCDC144CP	Q8IYA2	1237 aa		9.96	□□□□□ -0.81
SPTAN1-223	ENST00000630866	HAND2	P61296	217 aa		9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	IP6K1	Q92551	441 aa		9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	SLC4A4	Q9Y6R1	1079 aa		9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	NASP	P49321	788 aa	Predicted RBP	9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	ARHGEF10	O15013	1369 aa		9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	KIAA0556	O60303	1618 aa		9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	ADAMTS12	P58397	1594 aa		9.96	□□□□□ -0.82
SPTAN1-223	ENST00000630866	KSR2	Q6VAB6	950 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	ORAI2	Q96SN7	254 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	SYCP3	Q8IZU3	236 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	NCOA7	Q8NI08	942 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	ZFY	P08048	801 aa	Predicted RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	NFKBIB	Q15653	356 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	LEKR1	Q6ZMV7	388 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	PICK1	Q9NRD5	415 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	IL15	P40933	162 aa	Predicted RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	HMGN5	P82970	282 aa	Known RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	GUCY1B3	Q02153	619 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	CETN1	Q12798	172 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	CFAP74	Q9C0B2	1584 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	LDHB	P07195	334 aa	Known RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	IFIT1B	Q5T764	474 aa	Known RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	BICD1	Q96G01	975 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	NPAT	Q14207	1427 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	NUP153	P49790	1475 aa	Known RBP	9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	FERMT2	Q96AC1	680 aa		9.95	□□□□□ -0.82
SPTAN1-223	ENST00000630866	CCT2	P78371	535 aa	Known RBP	9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	LARGE2	Q8N3Y3	721 aa		9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	KRT23	Q9C075	422 aa		9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	IARS	P41252	1262 aa	Known RBP	9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	NCBP1	Q09161	790 aa	Known RBP	9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	ENOX2	Q16206	610 aa	Known RBP	9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	MICU3	Q86XE3	530 aa		9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	MAGEB6P1	A0A0J9YX57	407 aa		9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	SMTNL1	A8MU46	457 aa		9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	ESR2	Q92731	530 aa		9.94	□□□□□ -0.82
SPTAN1-223	ENST00000630866	AMPD3	Q01432	767 aa		9.94	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms