RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 NOGQ13253 232 aa16.17■□□□□ 0.18
CHD2-218ENST00000629346 GPRC5DQ9NZD1 345 aa16.17■□□□□ 0.18
CHD2-218ENST00000629346 BCORQ6W2J9 1755 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 KCNQ3O43525 872 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 SLC51AQ86UW1 340 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 NIM1KQ8IY84 436 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 SNED1Q8TER0 1413 aa16.16■□□□□ 0.18
CHD2-218ENST00000629346 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
CHD2-218ENST00000629346 HUNKP57058 714 aa16.14■□□□□ 0.17
CHD2-218ENST00000629346 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
CHD2-218ENST00000629346 PPIP5K2O43314 1243 aa16.13■□□□□ 0.17
CHD2-218ENST00000629346 TRPA1O75762 1119 aa16.13■□□□□ 0.17
CHD2-218ENST00000629346 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
CHD2-218ENST00000629346 RPGRQ92834 1020 aaKnown RBP16.13■□□□□ 0.17
CHD2-218ENST00000629346 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
CHD2-218ENST00000629346 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
CHD2-218ENST00000629346 GMPSP49915 693 aaPredicted RBP16.12■□□□□ 0.17
CHD2-218ENST00000629346 AOC3Q16853 763 aa16.12■□□□□ 0.17
CHD2-218ENST00000629346 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
CHD2-218ENST00000629346 KIF23Q02241 960 aaPredicted RBP16.11■□□□□ 0.17
CHD2-218ENST00000629346 CXCL9Q07325 125 aa16.11■□□□□ 0.17
CHD2-218ENST00000629346 HLFQ16534 295 aa16.11■□□□□ 0.17
CHD2-218ENST00000629346 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
CHD2-218ENST00000629346 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
CHD2-218ENST00000629346 PGAP2Q9UHJ9 254 aa16.11■□□□□ 0.17
CHD2-218ENST00000629346 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
CHD2-218ENST00000629346 HIRAP54198 1017 aaPredicted RBP16.1■□□□□ 0.17
CHD2-218ENST00000629346 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
CHD2-218ENST00000629346 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
CHD2-218ENST00000629346 RNF186Q9NXI6 227 aa16.1■□□□□ 0.17
CHD2-218ENST00000629346 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
CHD2-218ENST00000629346 FAM155AB1AL88 458 aaPredicted RBP16.09■□□□□ 0.17
CHD2-218ENST00000629346 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
CHD2-218ENST00000629346 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
CHD2-218ENST00000629346 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
CHD2-218ENST00000629346 RGMBQ6NW40 437 aa16.09■□□□□ 0.17
CHD2-218ENST00000629346 CTU1Q7Z7A3 348 aaKnown RBP16.09■□□□□ 0.17
CHD2-218ENST00000629346 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
CHD2-218ENST00000629346 SAGE1Q9NXZ1 904 aa16.09■□□□□ 0.17
CHD2-218ENST00000629346 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
CHD2-218ENST00000629346 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
CHD2-218ENST00000629346 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
CHD2-218ENST00000629346 TRPM4Q8TD43 1214 aa16.08■□□□□ 0.16
CHD2-218ENST00000629346 ZC3H15Q8WU90 426 aaKnown RBP16.08■□□□□ 0.16
CHD2-218ENST00000629346 ZNRF3Q9ULT6 936 aa16.08■□□□□ 0.16
CHD2-218ENST00000629346 HPS5Q9UPZ3 1129 aa16.08■□□□□ 0.16
CHD2-218ENST00000629346 SHTN1A0MZ66 631 aa16.07■□□□□ 0.16
CHD2-218ENST00000629346 RAD17O75943 681 aa16.07■□□□□ 0.16
CHD2-218ENST00000629346 HOXA10P31260 410 aaPredicted RBP16.07■□□□□ 0.16
CHD2-218ENST00000629346 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
CHD2-218ENST00000629346 RBM17Q96I25 401 aaKnown RBP16.07■□□□□ 0.16
CHD2-218ENST00000629346 NYXQ9GZU5 481 aa16.07■□□□□ 0.16
CHD2-218ENST00000629346 SIPA1L3O60292 1781 aaPredicted RBP16.06■□□□□ 0.16
CHD2-218ENST00000629346 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
CHD2-218ENST00000629346 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
CHD2-218ENST00000629346 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
CHD2-218ENST00000629346 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
CHD2-218ENST00000629346 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
CHD2-218ENST00000629346 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
CHD2-218ENST00000629346 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
CHD2-218ENST00000629346 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
CHD2-218ENST00000629346 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
CHD2-218ENST00000629346 CRAMP1Q96RY5 1269 aa16.05■□□□□ 0.16
CHD2-218ENST00000629346 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
CHD2-218ENST00000629346 CNOT7Q9UIV1 285 aaKnown RBP16.05■□□□□ 0.16
CHD2-218ENST00000629346 HABP4Q5JVS0 413 aaKnown RBP16.04■□□□□ 0.16
CHD2-218ENST00000629346 C2orf69Q8N8R5 385 aa16.04■□□□□ 0.16
CHD2-218ENST00000629346 H7C1D1 291 aa16.03■□□□□ 0.16
CHD2-218ENST00000629346 RGL2O15211 777 aa16.03■□□□□ 0.16
CHD2-218ENST00000629346 GPTP24298 496 aa16.03■□□□□ 0.16
CHD2-218ENST00000629346 TNIP1Q15025 636 aa16.03■□□□□ 0.16
CHD2-218ENST00000629346 CSRNP1Q96S65 589 aa16.03■□□□□ 0.16
CHD2-218ENST00000629346 KIF7Q2M1P5 1343 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 SAMD7Q7Z3H4 446 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 KRT26Q7Z3Y9 468 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 SUPT20HQ8NEM7 779 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 VPS33BQ9H267 617 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.16
CHD2-218ENST00000629346 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
CHD2-218ENST00000629346 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
CHD2-218ENST00000629346 ADM5C9JUS6 153 aa16.01■□□□□ 0.15
CHD2-218ENST00000629346 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
CHD2-218ENST00000629346 ATP6V0A2Q9Y487 856 aa16.01■□□□□ 0.15
CHD2-218ENST00000629346 TBC1D10BQ4KMP7 808 aaPredicted RBP16■□□□□ 0.15
CHD2-218ENST00000629346 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
CHD2-218ENST00000629346 SUSD4Q5VX71 490 aa16■□□□□ 0.15
CHD2-218ENST00000629346 DPP8Q6V1X1 898 aaPredicted RBP16■□□□□ 0.15
CHD2-218ENST00000629346 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
CHD2-218ENST00000629346 AKAP11Q9UKA4 1901 aa16■□□□□ 0.15
CHD2-218ENST00000629346 SLC10A3P09131 477 aa15.99■□□□□ 0.15
CHD2-218ENST00000629346 RBM26Q5T8P6 1007 aaKnown RBP15.99■□□□□ 0.15
CHD2-218ENST00000629346 PHACTR3Q96KR7 559 aa15.99■□□□□ 0.15
CHD2-218ENST00000629346 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
CHD2-218ENST00000629346 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 YDJCA8MPS7 323 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 HSPA5P11021 654 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms