RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ANKRD13DQ6ZTN6 518 aa14.06□□□□□ -0.16
SSBP4-215ENST00000625926 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
SSBP4-215ENST00000625926 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
SSBP4-215ENST00000625926 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
SSBP4-215ENST00000625926 NLRP3Q96P20 1036 aa14.06□□□□□ -0.16
SSBP4-215ENST00000625926 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
SSBP4-215ENST00000625926 HYPKQ9NX55 129 aa14.06□□□□□ -0.16
SSBP4-215ENST00000625926 BRCA1P38398 1863 aaKnown RBP14.06□□□□□ -0.16
SSBP4-215ENST00000625926 BCORQ6W2J9 1755 aa14.05□□□□□ -0.16
SSBP4-215ENST00000625926 VEGFAP15692 232 aaPredicted RBP14.05□□□□□ -0.16
SSBP4-215ENST00000625926 FKBP4Q02790 459 aaKnown RBP eCLIP14.05□□□□□ -0.16
SSBP4-215ENST00000625926 NLRP10Q86W26 655 aa14.05□□□□□ -0.16
SSBP4-215ENST00000625926 PLBD2Q8NHP8 589 aa14.05□□□□□ -0.16
SSBP4-215ENST00000625926 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
SSBP4-215ENST00000625926 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 ELL2O00472 640 aaPredicted RBP14.04□□□□□ -0.16
SSBP4-215ENST00000625926 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 OLFM4Q6UX06 510 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
SSBP4-215ENST00000625926 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
SSBP4-215ENST00000625926 FSTL1Q12841 308 aa14.03□□□□□ -0.16
SSBP4-215ENST00000625926 DNAJC5GQ8N7S2 189 aa14.03□□□□□ -0.16
SSBP4-215ENST00000625926 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
SSBP4-215ENST00000625926 GRIPAP1Q4V328 841 aa14.02□□□□□ -0.17
SSBP4-215ENST00000625926 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
SSBP4-215ENST00000625926 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
SSBP4-215ENST00000625926 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
SSBP4-215ENST00000625926 C8orf58Q8NAV2 365 aa14.02□□□□□ -0.17
SSBP4-215ENST00000625926 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
SSBP4-215ENST00000625926 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
SSBP4-215ENST00000625926 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
SSBP4-215ENST00000625926 APLP1P51693 650 aa14.01□□□□□ -0.17
SSBP4-215ENST00000625926 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
SSBP4-215ENST00000625926 SMC1BQ8NDV3 1235 aa14.01□□□□□ -0.17
SSBP4-215ENST00000625926 PSMD1Q99460 953 aa14.01□□□□□ -0.17
SSBP4-215ENST00000625926 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
SSBP4-215ENST00000625926 TMX4Q9H1E5 349 aaPredicted RBP14.01□□□□□ -0.17
SSBP4-215ENST00000625926 ANKRD31Q8N7Z5 1873 aa14.01□□□□□ -0.17
SSBP4-215ENST00000625926 POTECB2RU33 542 aa14□□□□□ -0.17
SSBP4-215ENST00000625926 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
SSBP4-215ENST00000625926 IARSP41252 1262 aaKnown RBP14□□□□□ -0.17
SSBP4-215ENST00000625926 GOLGA2Q08379 1002 aa14□□□□□ -0.17
SSBP4-215ENST00000625926 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
SSBP4-215ENST00000625926 RIC3Q7Z5B4 369 aa14□□□□□ -0.17
SSBP4-215ENST00000625926 DLEC1Q9Y238 1755 aa14□□□□□ -0.17
SSBP4-215ENST00000625926 ATP5J2-PTCD1G3V325 749 aa13.99□□□□□ -0.17
SSBP4-215ENST00000625926 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
SSBP4-215ENST00000625926 BBOX1O75936 387 aa13.99□□□□□ -0.17
SSBP4-215ENST00000625926 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
SSBP4-215ENST00000625926 JDP2Q8WYK2 163 aa13.99□□□□□ -0.17
SSBP4-215ENST00000625926 PHAXQ9H814 394 aaKnown RBP13.99□□□□□ -0.17
SSBP4-215ENST00000625926 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
SSBP4-215ENST00000625926 IL16Q14005 1332 aa13.98□□□□□ -0.17
SSBP4-215ENST00000625926 DDX46Q7L014 1031 aaKnown RBP13.98□□□□□ -0.17
SSBP4-215ENST00000625926 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
SSBP4-215ENST00000625926 TSR2Q969E8 191 aaKnown RBP13.98□□□□□ -0.17
SSBP4-215ENST00000625926 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
SSBP4-215ENST00000625926 ATP6V0A2Q9Y487 856 aa13.98□□□□□ -0.17
SSBP4-215ENST00000625926 ABCC4O15439 1325 aa13.97□□□□□ -0.17
SSBP4-215ENST00000625926 FZD9O00144 591 aa13.97□□□□□ -0.17
SSBP4-215ENST00000625926 DDX58O95786 925 aaKnown RBP13.97□□□□□ -0.17
SSBP4-215ENST00000625926 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
SSBP4-215ENST00000625926 IQCA1LA6NCM1 817 aa13.96□□□□□ -0.17
SSBP4-215ENST00000625926 WDR63Q8IWG1 891 aa13.96□□□□□ -0.17
SSBP4-215ENST00000625926 SP8Q8IXZ3 490 aa13.96□□□□□ -0.17
SSBP4-215ENST00000625926 L3MBTL3Q96JM7 780 aaPredicted RBP13.96□□□□□ -0.17
SSBP4-215ENST00000625926 STK31Q9BXU1 1019 aa13.96□□□□□ -0.17
SSBP4-215ENST00000625926 SLX4Q8IY92 1834 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 GRAPQ13588 217 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
SSBP4-215ENST00000625926 TWISTNBQ3B726 338 aaPredicted RBP13.95□□□□□ -0.18
SSBP4-215ENST00000625926 FAM9BQ8IZU0 186 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 LARGE2Q8N3Y3 721 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
SSBP4-215ENST00000625926 MYD88Q99836 296 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 VPS33BQ9H267 617 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 SALL2Q9Y467 1007 aaPredicted RBP13.95□□□□□ -0.18
SSBP4-215ENST00000625926 SNED1Q8TER0 1413 aa13.95□□□□□ -0.18
SSBP4-215ENST00000625926 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
SSBP4-215ENST00000625926 IRS4O14654 1257 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-215ENST00000625926 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
SSBP4-215ENST00000625926 EIF6P56537 245 aaKnown RBP13.94□□□□□ -0.18
SSBP4-215ENST00000625926 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-215ENST00000625926 TMC4Q7Z404 712 aa13.94□□□□□ -0.18
SSBP4-215ENST00000625926 SLC51AQ86UW1 340 aa13.94□□□□□ -0.18
SSBP4-215ENST00000625926 GPC2Q8N158 579 aa13.94□□□□□ -0.18
SSBP4-215ENST00000625926 ZBTB38Q8NAP3 1195 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-215ENST00000625926 CCDC191Q8NCU4 936 aa13.94□□□□□ -0.18
SSBP4-215ENST00000625926 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-215ENST00000625926 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
SSBP4-215ENST00000625926 KSR2Q6VAB6 950 aa13.93□□□□□ -0.18
SSBP4-215ENST00000625926 MPNDQ8N594 471 aa13.93□□□□□ -0.18
SSBP4-215ENST00000625926 RTFDC1Q9BY42 306 aaPredicted RBP13.93□□□□□ -0.18
SSBP4-215ENST00000625926 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms