RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 GGNBP2Q9H3C7 697 aa6.98□□□□□ -1.29
CDR1-202ENST00000625883 USP20Q9Y2K6 914 aa6.98□□□□□ -1.29
CDR1-202ENST00000625883 USP5P45974 858 aa6.98□□□□□ -1.29
CDR1-202ENST00000625883 RANGAP1P46060 587 aaPredicted RBP6.98□□□□□ -1.29
CDR1-202ENST00000625883 ARSDP51689 593 aa6.98□□□□□ -1.29
CDR1-202ENST00000625883 PDE3BQ13370 1112 aa6.98□□□□□ -1.29
CDR1-202ENST00000625883 GAS2L1Q99501 681 aaPredicted RBP6.98□□□□□ -1.29
CDR1-202ENST00000625883 NXF1Q9UBU9 619 aaKnown RBP6.98□□□□□ -1.29
CDR1-202ENST00000625883 SLC35F4A4IF30 521 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 A6NHS1 94 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 PTSQ03393 145 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 EHHADHQ08426 723 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 TRIP4Q15650 581 aaPredicted RBP6.97□□□□□ -1.29
CDR1-202ENST00000625883 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
CDR1-202ENST00000625883 NEUROD4Q9HD90 331 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 KCNMB2Q9Y691 235 aa6.97□□□□□ -1.29
CDR1-202ENST00000625883 NLRP8Q86W28 1048 aa6.96□□□□□ -1.3
CDR1-202ENST00000625883 PIK3R5Q8WYR1 880 aa6.96□□□□□ -1.3
CDR1-202ENST00000625883 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
CDR1-202ENST00000625883 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
CDR1-202ENST00000625883 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
CDR1-202ENST00000625883 E9PSI1 815 aa6.95□□□□□ -1.3
CDR1-202ENST00000625883 PLCB3Q01970 1234 aa6.95□□□□□ -1.3
CDR1-202ENST00000625883 UBAP2LQ14157 1087 aaKnown RBP6.95□□□□□ -1.3
CDR1-202ENST00000625883 SAMD5Q5TGI4 173 aa6.95□□□□□ -1.3
CDR1-202ENST00000625883 PGBD3Q8N328 593 aa6.95□□□□□ -1.3
CDR1-202ENST00000625883 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
CDR1-202ENST00000625883 CEP63Q96MT8 703 aa6.95□□□□□ -1.3
CDR1-202ENST00000625883 GJA3Q9Y6H8 435 aa6.95□□□□□ -1.3
CDR1-202ENST00000625883 TERTO14746 1132 aaKnown RBP6.94□□□□□ -1.3
CDR1-202ENST00000625883 PCSK2P16519 638 aa6.94□□□□□ -1.3
CDR1-202ENST00000625883 MAPK8P45983 427 aa6.94□□□□□ -1.3
CDR1-202ENST00000625883 C8orf34Q49A92 452 aa6.94□□□□□ -1.3
CDR1-202ENST00000625883 ZNF326Q5BKZ1 582 aaKnown RBP6.94□□□□□ -1.3
CDR1-202ENST00000625883 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
CDR1-202ENST00000625883 CUEDC1Q9NWM3 386 aaPredicted RBP6.94□□□□□ -1.3
CDR1-202ENST00000625883 RPLP1P05386 114 aaKnown RBP6.93□□□□□ -1.3
CDR1-202ENST00000625883 ORC1Q13415 861 aa6.93□□□□□ -1.3
CDR1-202ENST00000625883 LBRQ14739 615 aaKnown RBP6.93□□□□□ -1.3
CDR1-202ENST00000625883 EFHC2Q5JST6 749 aa6.93□□□□□ -1.3
CDR1-202ENST00000625883 CMTR1Q8N1G2 835 aaKnown RBP6.93□□□□□ -1.3
CDR1-202ENST00000625883 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
CDR1-202ENST00000625883 MRRFQ96E11 262 aaKnown RBP6.93□□□□□ -1.3
CDR1-202ENST00000625883 SETDB2Q96T68 719 aa6.93□□□□□ -1.3
CDR1-202ENST00000625883 BRD7Q9NPI1 651 aa6.93□□□□□ -1.3
CDR1-202ENST00000625883 WFS1O76024 890 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
CDR1-202ENST00000625883 RIPOR1Q6ZS17 1223 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 IRF7Q92985 503 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 HCN2Q9UL51 889 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 WWC3Q9ULE0 1092 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 EFSO43281 561 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 LDHBP07195 334 aaKnown RBP6.92□□□□□ -1.3
CDR1-202ENST00000625883 FAM157BP0CG42 384 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 DBN1Q16643 649 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 XKR5Q6UX68 686 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 CFHR5Q9BXR6 569 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 NUCKS1Q9H1E3 243 aaKnown RBP6.92□□□□□ -1.3
CDR1-202ENST00000625883 RNF19AQ9NV58 838 aa6.92□□□□□ -1.3
CDR1-202ENST00000625883 PNMA6FA0A0J9YX94 578 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 ATXN7O15265 892 aaPredicted RBP6.91□□□□□ -1.3
CDR1-202ENST00000625883 EPB42P16452 691 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 KCNQ4P56696 695 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
CDR1-202ENST00000625883 TREML4Q6UXN2 200 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 TTC16Q8NEE8 873 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 CSRNP1Q96S65 589 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 NDFIP2Q9NV92 336 aa6.91□□□□□ -1.3
CDR1-202ENST00000625883 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
CDR1-202ENST00000625883 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
CDR1-202ENST00000625883 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 H3BM21 787 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 EIF1AYO14602 144 aaKnown RBP6.9□□□□□ -1.31
CDR1-202ENST00000625883 XYLBO75191 536 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 PRPF40AO75400 957 aaKnown RBP6.9□□□□□ -1.31
CDR1-202ENST00000625883 TNFRSF21O75509 655 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 EGFRP00533 1210 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 TNP2Q05952 138 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 SFSWAPQ12872 951 aaKnown RBP6.9□□□□□ -1.31
CDR1-202ENST00000625883 FIGNL1Q6PIW4 674 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 GMCL1Q96IK5 515 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 STRN4Q9NRL3 753 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.31
CDR1-202ENST00000625883 H7C1W4 665 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 BNIP3LO60238 219 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 ITGA6P23229 1130 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 ZNF837Q96EG3 531 aaPredicted RBP6.89□□□□□ -1.31
CDR1-202ENST00000625883 DUSP9Q99956 384 aaKnown RBP6.89□□□□□ -1.31
CDR1-202ENST00000625883 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 C11orf16Q9NQ32 467 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 KCNH4Q9UQ05 1017 aa6.89□□□□□ -1.31
CDR1-202ENST00000625883 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
CDR1-202ENST00000625883 MAPTP10636 758 aaKnown RBP6.88□□□□□ -1.31
CDR1-202ENST00000625883 VAMP1P23763 118 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms