RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 FUT2Q10981 343 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 PLEKHO1Q53GL0 409 aaPredicted RBP8.63□□□□□ -1.03
TCF4-249ENST00000625716 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 IFNL2Q8IZJ0 200 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 SLC6A16Q9GZN6 736 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 MAP2P11137 1827 aaKnown RBP8.63□□□□□ -1.03
TCF4-249ENST00000625716 SBF2Q86WG5 1849 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
TCF4-249ENST00000625716 NHSQ6T4R5 1651 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 CYP27B1O15528 508 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 MTHFSP49914 203 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 SLC15A2Q16348 729 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 MPRIPQ6WCQ1 1025 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 SPON1Q9HCB6 807 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 RREB1Q92766 1687 aa8.62□□□□□ -1.03
TCF4-249ENST00000625716 RGPD3A6NKT7 1758 aaPredicted RBP8.61□□□□□ -1.03
TCF4-249ENST00000625716 RGPD4Q7Z3J3 1758 aa8.61□□□□□ -1.03
TCF4-249ENST00000625716 IGSF1Q8N6C5 1336 aa8.61□□□□□ -1.03
TCF4-249ENST00000625716 NUP188Q5SRE5 1749 aa8.61□□□□□ -1.03
TCF4-249ENST00000625716 DIAPH1O60610 1272 aaKnown RBP8.61□□□□□ -1.03
TCF4-249ENST00000625716 SULT6B1Q6IMI4 303 aa8.61□□□□□ -1.03
TCF4-249ENST00000625716 ZNF598Q86UK7 904 aaKnown RBP8.61□□□□□ -1.03
TCF4-249ENST00000625716 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
TCF4-249ENST00000625716 SPSB2Q99619 263 aa8.61□□□□□ -1.03
TCF4-249ENST00000625716 PPP1R1BQ9UD71 204 aaPredicted RBP8.61□□□□□ -1.03
TCF4-249ENST00000625716 SLC27A5Q9Y2P5 690 aa8.61□□□□□ -1.03
TCF4-249ENST00000625716 HSP90AB1P08238 724 aaKnown RBP8.6□□□□□ -1.03
TCF4-249ENST00000625716 PHKG2P15735 406 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 IL13P35225 146 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 C1orf141Q5JVX7 400 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
TCF4-249ENST00000625716 CFAP53Q96M91 514 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 TMOD3Q9NYL9 352 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 CCNL1Q9UK58 526 aaPredicted RBP8.6□□□□□ -1.03
TCF4-249ENST00000625716 NCAPD2Q15021 1401 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 PLEKHG2Q9H7P9 1386 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 NPC1L1Q9UHC9 1359 aa8.6□□□□□ -1.03
TCF4-249ENST00000625716 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
TCF4-249ENST00000625716 ZNF530Q6P9A1 599 aaPredicted RBP8.59□□□□□ -1.03
TCF4-249ENST00000625716 LRRC4BQ9NT99 713 aa8.59□□□□□ -1.03
TCF4-249ENST00000625716 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
TCF4-249ENST00000625716 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 IRF6O14896 467 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 U2SURPO15042 1029 aaKnown RBP8.58□□□□□ -1.04
TCF4-249ENST00000625716 GDF9O60383 454 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 KCNQ4P56696 695 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 DCAF5Q96JK2 942 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 BTAF1O14981 1849 aa8.58□□□□□ -1.04
TCF4-249ENST00000625716 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 ERVV-2B6SEH9 535 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 HMOX1P09601 288 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 CABP4P57796 275 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 PIGBQ92521 554 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 NUDCQ9Y266 331 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 LRP5O75197 1615 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
TCF4-249ENST00000625716 CD46P15529 392 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 ZEB1P37275 1124 aaPredicted RBP8.56□□□□□ -1.04
TCF4-249ENST00000625716 PRR20EP86478 221 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 PRR20CP86479 221 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 PRR20DP86480 221 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 PRR20BP86481 221 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 PRR20AP86496 221 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 ZNF827Q17R98 1081 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 MTFR1LQ9H019 292 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 PKD1L3Q7Z443 1732 aa8.56□□□□□ -1.04
TCF4-249ENST00000625716 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
TCF4-249ENST00000625716 RNF19BQ6ZMZ0 732 aa8.55□□□□□ -1.04
TCF4-249ENST00000625716 SLC16A10Q8TF71 515 aa8.55□□□□□ -1.04
TCF4-249ENST00000625716 AK7Q96M32 723 aa8.55□□□□□ -1.04
TCF4-249ENST00000625716 PDGFDQ9GZP0 370 aaPredicted RBP8.55□□□□□ -1.04
TCF4-249ENST00000625716 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
TCF4-249ENST00000625716 SALL2Q9Y467 1007 aaPredicted RBP8.55□□□□□ -1.04
TCF4-249ENST00000625716 KDRP35968 1356 aa8.55□□□□□ -1.04
TCF4-249ENST00000625716 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
TCF4-249ENST00000625716 POLD1P28340 1107 aa8.54□□□□□ -1.04
TCF4-249ENST00000625716 PPP2R1AP30153 589 aa8.54□□□□□ -1.04
TCF4-249ENST00000625716 SIK1P57059 783 aa8.54□□□□□ -1.04
TCF4-249ENST00000625716 FLAD1Q8NFF5 587 aa8.54□□□□□ -1.04
TCF4-249ENST00000625716 ASAP1Q9ULH1 1129 aa8.54□□□□□ -1.04
TCF4-249ENST00000625716 TNFRSF10AO00220 468 aa8.53□□□□□ -1.04
TCF4-249ENST00000625716 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
TCF4-249ENST00000625716 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
TCF4-249ENST00000625716 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
TCF4-249ENST00000625716 PKD2L1Q9P0L9 805 aa8.53□□□□□ -1.04
TCF4-249ENST00000625716 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
TCF4-249ENST00000625716 NEFMP07197 916 aa8.52□□□□□ -1.05
TCF4-249ENST00000625716 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
TCF4-249ENST00000625716 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
TCF4-249ENST00000625716 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
TCF4-249ENST00000625716 DDX10Q13206 875 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms