RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 NECAB1Q8N987 351 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 TCHHQ07283 1943 aa13.48□□□□□ -0.25
VARS2-213ENST00000625423 UTYO14607 1347 aa13.48□□□□□ -0.25
VARS2-213ENST00000625423 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
VARS2-213ENST00000625423 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
VARS2-213ENST00000625423 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
VARS2-213ENST00000625423 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
VARS2-213ENST00000625423 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
VARS2-213ENST00000625423 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
VARS2-213ENST00000625423 MYL6BP14649 208 aa13.48□□□□□ -0.25
VARS2-213ENST00000625423 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
VARS2-213ENST00000625423 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 HIP1O00291 1037 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
VARS2-213ENST00000625423 MPNDQ8N594 471 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 USP25Q9UHP3 1055 aa13.47□□□□□ -0.25
VARS2-213ENST00000625423 SLC27A2O14975 620 aa13.46□□□□□ -0.25
VARS2-213ENST00000625423 LETM1O95202 739 aaPredicted RBP13.46□□□□□ -0.25
VARS2-213ENST00000625423 UVSSAQ2YD98 709 aa13.46□□□□□ -0.25
VARS2-213ENST00000625423 ZNF790Q6PG37 636 aa13.46□□□□□ -0.25
VARS2-213ENST00000625423 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.26
VARS2-213ENST00000625423 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.26
VARS2-213ENST00000625423 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.26
VARS2-213ENST00000625423 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
VARS2-213ENST00000625423 SLIT3O75094 1523 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 NEURL1BA8MQ27 555 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 TERF1P54274 439 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 KRT28Q7Z3Y7 464 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 MYD88Q99836 296 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 PSMA5P28066 241 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 NEXNQ0ZGT2 675 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
VARS2-213ENST00000625423 GCKRQ14397 625 aa13.44□□□□□ -0.26
VARS2-213ENST00000625423 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
VARS2-213ENST00000625423 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
VARS2-213ENST00000625423 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
VARS2-213ENST00000625423 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
VARS2-213ENST00000625423 ZNF589Q86UQ0 364 aaPredicted RBP13.44□□□□□ -0.26
VARS2-213ENST00000625423 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
VARS2-213ENST00000625423 SNRKQ9NRH2 765 aa13.44□□□□□ -0.26
VARS2-213ENST00000625423 ERBB3P21860 1342 aa13.44□□□□□ -0.26
VARS2-213ENST00000625423 ADCY5O95622 1261 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 BLOC1S2Q6QNY1 142 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 FERMT3Q86UX7 667 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 SLC52A2Q9HAB3 445 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 PIP4K2AP48426 406 aaPredicted RBP13.43□□□□□ -0.26
VARS2-213ENST00000625423 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 ZNF830Q96NB3 372 aaPredicted RBP13.43□□□□□ -0.26
VARS2-213ENST00000625423 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 NLRP2Q9NX02 1062 aa13.43□□□□□ -0.26
VARS2-213ENST00000625423 FAM173BQ6P4H8 233 aa13.42□□□□□ -0.26
VARS2-213ENST00000625423 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
VARS2-213ENST00000625423 METTL22Q9BUU2 404 aaPredicted RBP13.42□□□□□ -0.26
VARS2-213ENST00000625423 NPHP4O75161 1426 aaPredicted RBP13.42□□□□□ -0.26
VARS2-213ENST00000625423 KIAA2012Q0VF49 1180 aa13.42□□□□□ -0.26
VARS2-213ENST00000625423 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
VARS2-213ENST00000625423 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
VARS2-213ENST00000625423 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
VARS2-213ENST00000625423 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 UQCRHLA0A096LP55 91 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 UQCRHP07919 91 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 RBM10P98175 930 aaKnown RBP13.41□□□□□ -0.26
VARS2-213ENST00000625423 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
VARS2-213ENST00000625423 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
VARS2-213ENST00000625423 PHKG2P15735 406 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 STK3Q13188 491 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 TTC6Q86TZ1 520 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 NDUFB9Q9Y6M9 179 aa13.41□□□□□ -0.26
VARS2-213ENST00000625423 SIPA1L3O60292 1781 aaPredicted RBP13.41□□□□□ -0.26
VARS2-213ENST00000625423 KDM4AO75164 1064 aa13.4□□□□□ -0.26
VARS2-213ENST00000625423 TAF5LO75529 589 aa13.4□□□□□ -0.26
VARS2-213ENST00000625423 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
VARS2-213ENST00000625423 DBNLQ9UJU6 430 aaKnown RBP13.4□□□□□ -0.26
VARS2-213ENST00000625423 KRT85P78386 507 aa13.4□□□□□ -0.26
VARS2-213ENST00000625423 TFCP2Q12800 502 aa13.4□□□□□ -0.26
VARS2-213ENST00000625423 TTC12Q9H892 705 aaPredicted RBP13.4□□□□□ -0.26
VARS2-213ENST00000625423 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
VARS2-213ENST00000625423 PTPN12Q05209 780 aaKnown RBP13.4□□□□□ -0.26
VARS2-213ENST00000625423 ARID3AQ99856 593 aa13.4□□□□□ -0.26
VARS2-213ENST00000625423 CAMTA1Q9Y6Y1 1673 aa13.39□□□□□ -0.27
VARS2-213ENST00000625423 CHGBP05060 677 aa13.39□□□□□ -0.27
VARS2-213ENST00000625423 PDCP20941 246 aa13.39□□□□□ -0.27
VARS2-213ENST00000625423 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
VARS2-213ENST00000625423 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms