RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 ORC1Q13415 861 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 GRIN2CQ14957 1233 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 TRIM47Q96LD4 638 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 DMRTB1Q96MA1 342 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 CITED4Q96RK1 184 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 GAS2L1Q99501 681 aaPredicted RBP4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 CFHR5Q9BXR6 569 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 NIF3L1Q9GZT8 377 aa4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 RTCBQ9Y3I0 505 aaKnown RBP4.73□□□□□ -1.65
SCARNA4-202ENST00000625402 EFSO43281 561 aa4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 COL19A1Q14993 1142 aa4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 HIF1AQ16665 826 aa4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 SAMD5Q5TGI4 173 aa4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 TMC1Q8TDI8 760 aa4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 ZCCHC2Q9C0B9 1178 aaKnown RBP4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 FOXD3Q9UJU5 478 aaPredicted RBP4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 WWC3Q9ULE0 1092 aa4.72□□□□□ -1.65
SCARNA4-202ENST00000625402 DCDC2BA2VCK2 349 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 MAPK8P45983 427 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 PDE3BQ13370 1112 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 DBN1Q16643 649 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 C8orf34Q49A92 452 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 EAPPQ56P03 285 aaPredicted RBP4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 USPL1Q5W0Q7 1092 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 NLRP8Q86W28 1048 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 CCDC155Q8N6L0 562 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 MRRFQ96E11 262 aaKnown RBP4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 ZNF837Q96EG3 531 aaPredicted RBP4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 BRD7Q9NPI1 651 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 STRN4Q9NRL3 753 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 TMEM63CQ9P1W3 806 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 ANKIB1Q9P2G1 1089 aa4.71□□□□□ -1.66
SCARNA4-202ENST00000625402 PNMA6FA0A0J9YX94 578 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 POTECB2RU33 542 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 RECKO95980 971 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 FAM157BP0CG42 384 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 USP5P45974 858 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 SFSWAPQ12872 951 aaKnown RBP4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 ENOX2Q16206 610 aaKnown RBP4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 RIPOR1Q6ZS17 1223 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 CMTR1Q8N1G2 835 aaKnown RBP4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 PGBD3Q8N328 593 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 CEP63Q96MT8 703 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 FAM161BQ96MY7 647 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 IGSF5Q9NSI5 407 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 NDFIP2Q9NV92 336 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 GJA3Q9Y6H8 435 aa4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.7□□□□□ -1.66
SCARNA4-202ENST00000625402 EIF1AYO14602 144 aaKnown RBP4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 BNIP3LO60238 219 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 TNFRSF21O75509 655 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 LDHBP07195 334 aaKnown RBP4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 RANGAP1P46060 587 aaPredicted RBP4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 EFHC2Q5JST6 749 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 PIK3R5Q8WYR1 880 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 ABHD17AQ96GS6 310 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 CSRNP1Q96S65 589 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 NUCKS1Q9H1E3 243 aaKnown RBP4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 CHRDQ9H2X0 955 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 NEUROD4Q9HD90 331 aa4.69□□□□□ -1.66
SCARNA4-202ENST00000625402 E9PSI1 815 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 UBAP1LF5GYI3 381 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 XYLBO75191 536 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 PRPF40AO75400 957 aaKnown RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 MAPTP10636 758 aaKnown RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 ITGA6P23229 1130 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 IRS1P35568 1242 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 KCNQ4P56696 695 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 PLCB3Q01970 1234 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 TNP2Q05952 138 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 MRPL58Q14197 206 aaKnown RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 LBRQ14739 615 aaKnown RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 LDLRAD1Q5T700 205 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 PDE12Q6L8Q7 609 aaKnown RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 PI16Q6UXB8 463 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 ZNF438Q7Z4V0 828 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 RAB44Q7Z6P3 723 aaPredicted RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 TRIM22Q8IYM9 498 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 KIFC2Q96AC6 838 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 DUSP9Q99956 384 aaKnown RBP4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 ELP3Q9H9T3 547 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 SENP2Q9HC62 589 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 FAM13BQ9NYF5 915 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 CNTN3Q9P232 1028 aa4.68□□□□□ -1.66
SCARNA4-202ENST00000625402 GPR25O00155 361 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 KHNYNO15037 678 aaKnown RBP4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 EGFRP00533 1210 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 CYP2E1P05181 493 aaPredicted RBP4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 POLR3DP05423 398 aaPredicted RBP4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 CD33P20138 364 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 ZNF326Q5BKZ1 582 aaKnown RBP4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 XKR5Q6UX68 686 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 SNX29Q8TEQ0 813 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 GTPBP3Q969Y2 492 aaKnown RBP4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 SLC30A3Q99726 388 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 ZFATQ9P243 1243 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 PARP2Q9UGN5 583 aa4.67□□□□□ -1.66
SCARNA4-202ENST00000625402 KCNH4Q9UQ05 1017 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms