RNA–Protein interactions for RNA: ENST00000625260.2

PFKFB3-216, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PFKFB3, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-216ENST00000625260 LRRC4BQ9NT99 713 aa26.39■■□□□ 1.82
PFKFB3-216ENST00000625260 SURF6O75683 361 aaKnown RBP26.38■■□□□ 1.81
PFKFB3-216ENST00000625260 C16orf71Q8IYS4 520 aaPredicted RBP26.38■■□□□ 1.81
PFKFB3-216ENST00000625260 NOP58Q9Y2X3 529 aaKnown RBP26.38■■□□□ 1.81
PFKFB3-216ENST00000625260 HMGB2P26583 209 aaKnown RBP26.37■■□□□ 1.81
PFKFB3-216ENST00000625260 RC3H1Q5TC82 1133 aaKnown RBP26.37■■□□□ 1.81
PFKFB3-216ENST00000625260 NLRP10Q86W26 655 aa26.37■■□□□ 1.81
PFKFB3-216ENST00000625260 PA2G4Q9UQ80 394 aaKnown RBP26.37■■□□□ 1.81
PFKFB3-216ENST00000625260 GNPATO15228 680 aa26.36■■□□□ 1.81
PFKFB3-216ENST00000625260 C8orf34Q49A92 452 aa26.36■■□□□ 1.81
PFKFB3-216ENST00000625260 BMP2KLQ5H9B9 411 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 ERC1Q8IUD2 1116 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 FAM89AQ96GI7 184 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 C4BP0C0L5 1744 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 UBN2Q6ZU65 1347 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 RGL2O15211 777 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 RABL6Q3YEC7 729 aaPredicted RBP26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 ZNF34Q8IZ26 560 aa26.35■■□□□ 1.81
PFKFB3-216ENST00000625260 EP400Q96L91 3159 aa26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 RPS6KA4O75676 772 aa26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 FOXO4P98177 505 aa26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 AMIGO3Q86WK7 504 aa26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 OTUD7AQ8TE49 926 aaPredicted RBP26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 KIF1BPQ96EK5 621 aa26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 BCORQ6W2J9 1755 aa26.34■■□□□ 1.81
PFKFB3-216ENST00000625260 SYNE4Q8N205 404 aa26.33■■□□□ 1.81
PFKFB3-216ENST00000625260 PCCAP05165 728 aaPredicted RBP26.33■■□□□ 1.8
PFKFB3-216ENST00000625260 LMBR1LQ6UX01 489 aa26.33■■□□□ 1.8
PFKFB3-216ENST00000625260 KLHDC4Q8TBB5 520 aa26.33■■□□□ 1.8
PFKFB3-216ENST00000625260 PLEKHM2Q8IWE5 1019 aa26.32■■□□□ 1.8
PFKFB3-216ENST00000625260 ZBTB38Q8NAP3 1195 aaPredicted RBP26.32■■□□□ 1.8
PFKFB3-216ENST00000625260 CHMP3Q9Y3E7 222 aa26.31■■□□□ 1.8
PFKFB3-216ENST00000625260 RTCBQ9Y3I0 505 aaKnown RBP26.31■■□□□ 1.8
PFKFB3-216ENST00000625260 FAM177BA6PVY3 158 aa26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 OSBPL3Q9H4L5 887 aa26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 EIF5BO60841 1220 aaKnown RBP26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 OS9Q13438 667 aaPredicted RBP26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 AK7Q96M32 723 aa26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 IL1RAPL2Q9NP60 686 aa26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 TRMT112Q9UI30 125 aaKnown RBP26.3■■□□□ 1.8
PFKFB3-216ENST00000625260 PHF14O94880 888 aa26.29■■□□□ 1.8
PFKFB3-216ENST00000625260 RHPN1Q8TCX5 695 aa26.29■■□□□ 1.8
PFKFB3-216ENST00000625260 SIL1Q9H173 461 aa26.29■■□□□ 1.8
PFKFB3-216ENST00000625260 SRP68Q9UHB9 627 aaKnown RBP26.29■■□□□ 1.8
PFKFB3-216ENST00000625260 APBA3O96018 575 aa26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 RFX5P48382 616 aaPredicted RBP26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 SUSD4Q5VX71 490 aa26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 PROM2Q8N271 834 aa26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 NIP7Q9Y221 180 aaKnown RBP eCLIP26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 TXNRD1Q16881 649 aa26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 SLC27A3Q5K4L6 730 aa26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 ZNF652Q9Y2D9 606 aa26.28■■□□□ 1.8
PFKFB3-216ENST00000625260 CDHR2Q9BYE9 1310 aa26.27■■□□□ 1.8
PFKFB3-216ENST00000625260 SCN7AQ01118 1682 aa26.27■■□□□ 1.8
PFKFB3-216ENST00000625260 USPL1Q5W0Q7 1092 aa26.27■■□□□ 1.8
PFKFB3-216ENST00000625260 ARHGEF1Q92888 912 aaKnown RBP26.27■■□□□ 1.8
PFKFB3-216ENST00000625260 PLA2G12BQ9BX93 195 aa26.27■■□□□ 1.8
PFKFB3-216ENST00000625260 COPRSQ9NQ92 184 aa26.27■■□□□ 1.8
PFKFB3-216ENST00000625260 G3BP1Q13283 466 aaKnown RBP eCLIP26.26■■□□□ 1.79
PFKFB3-216ENST00000625260 CLEC4GQ6UXB4 293 aa26.26■■□□□ 1.79
PFKFB3-216ENST00000625260 BCL2L12Q9HB09 334 aa26.26■■□□□ 1.79
PFKFB3-216ENST00000625260 NARFQ9UHQ1 456 aa26.26■■□□□ 1.79
PFKFB3-216ENST00000625260 AOX1Q06278 1338 aa26.26■■□□□ 1.79
PFKFB3-216ENST00000625260 PTPN12Q05209 780 aaKnown RBP26.25■■□□□ 1.79
PFKFB3-216ENST00000625260 CCDC85AQ96PX6 553 aaPredicted RBP26.25■■□□□ 1.79
PFKFB3-216ENST00000625260 PARP10Q53GL7 1025 aa26.25■■□□□ 1.79
PFKFB3-216ENST00000625260 IRS4O14654 1257 aaPredicted RBP26.24■■□□□ 1.79
PFKFB3-216ENST00000625260 HSP90B1P14625 803 aaKnown RBP26.24■■□□□ 1.79
PFKFB3-216ENST00000625260 TTC22Q5TAA0 569 aa26.24■■□□□ 1.79
PFKFB3-216ENST00000625260 C4AP0C0L4 1744 aa26.24■■□□□ 1.79
PFKFB3-216ENST00000625260 BICDL1Q6ZP65 573 aa26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 CLASRPQ8N2M8 674 aaKnown RBP26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 STAP2Q9UGK3 403 aa26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 ZPR1O75312 459 aa26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 PDE1AP54750 535 aa26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 TRAPPC3LQ5T215 181 aa26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 UTP14AQ9BVJ6 771 aaKnown RBP26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.23■■□□□ 1.79
PFKFB3-216ENST00000625260 SALL3Q9BXA9 1300 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 TNS1Q9HBL0 1735 aaKnown RBP26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 PLSCR1O15162 318 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 SASH1O94885 1247 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 MX1P20591 662 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 TBC1D9BQ66K14 1250 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 NUTM1Q86Y26 1132 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 UPF2Q9HAU5 1272 aaKnown RBP26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 UBR3Q6ZT12 1888 aa26.22■■□□□ 1.79
PFKFB3-216ENST00000625260 TSHZ3Q63HK5 1081 aa26.21■■□□□ 1.79
PFKFB3-216ENST00000625260 ZNF594Q96JF6 807 aaPredicted RBP26.21■■□□□ 1.79
PFKFB3-216ENST00000625260 NTSR2O95665 410 aa26.2■■□□□ 1.79
PFKFB3-216ENST00000625260 GSPT1P15170 499 aaKnown RBP26.2■■□□□ 1.78
PFKFB3-216ENST00000625260 RFC4P35249 363 aa26.2■■□□□ 1.78
PFKFB3-216ENST00000625260 FBXO3Q9UK99 471 aa26.2■■□□□ 1.78
PFKFB3-216ENST00000625260 SH3TC1Q8TE82 1336 aa26.2■■□□□ 1.78
PFKFB3-216ENST00000625260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.19■■□□□ 1.78
PFKFB3-216ENST00000625260 CSF1RP07333 972 aa26.19■■□□□ 1.78
PFKFB3-216ENST00000625260 HCLS1P14317 486 aaPredicted RBP26.19■■□□□ 1.78
PFKFB3-216ENST00000625260 ANP32AP39687 249 aaKnown RBP26.19■■□□□ 1.78
PFKFB3-216ENST00000625260 USP42Q9H9J4 1324 aaKnown RBP26.18■■□□□ 1.78
PFKFB3-216ENST00000625260 CTSWP56202 376 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms