RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 AIMP1Q12904 312 aaKnown RBP16.06■□□□□ 0.16
LINC00963-217ENST00000624009 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
LINC00963-217ENST00000624009 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
LINC00963-217ENST00000624009 LAMB2P55268 1798 aa16.05■□□□□ 0.16
LINC00963-217ENST00000624009 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
LINC00963-217ENST00000624009 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
LINC00963-217ENST00000624009 TIAM2Q8IVF5 1701 aa16.05■□□□□ 0.16
LINC00963-217ENST00000624009 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 NFKBIEO00221 500 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 RNF181Q9P0P0 153 aa16.04■□□□□ 0.16
LINC00963-217ENST00000624009 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
LINC00963-217ENST00000624009 C21orf2O43822 256 aa16.03■□□□□ 0.16
LINC00963-217ENST00000624009 DDX58O95786 925 aaKnown RBP16.03■□□□□ 0.16
LINC00963-217ENST00000624009 CCDC93Q567U6 631 aa16.03■□□□□ 0.16
LINC00963-217ENST00000624009 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
LINC00963-217ENST00000624009 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
LINC00963-217ENST00000624009 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
LINC00963-217ENST00000624009 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
LINC00963-217ENST00000624009 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
LINC00963-217ENST00000624009 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.16
LINC00963-217ENST00000624009 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
LINC00963-217ENST00000624009 HSP90B1P14625 803 aaKnown RBP16.02■□□□□ 0.16
LINC00963-217ENST00000624009 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
LINC00963-217ENST00000624009 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
LINC00963-217ENST00000624009 RPGRQ92834 1020 aaKnown RBP16.02■□□□□ 0.16
LINC00963-217ENST00000624009 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
LINC00963-217ENST00000624009 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
LINC00963-217ENST00000624009 CEP350Q5VT06 3117 aa16.02■□□□□ 0.15
LINC00963-217ENST00000624009 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
LINC00963-217ENST00000624009 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
LINC00963-217ENST00000624009 RBM17Q96I25 401 aaKnown RBP16.01■□□□□ 0.15
LINC00963-217ENST00000624009 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
LINC00963-217ENST00000624009 SNED1Q8TER0 1413 aa16.01■□□□□ 0.15
LINC00963-217ENST00000624009 C1QTNF8P60827 252 aa16■□□□□ 0.15
LINC00963-217ENST00000624009 RASSF7Q02833 373 aa16■□□□□ 0.15
LINC00963-217ENST00000624009 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
LINC00963-217ENST00000624009 MYH3P11055 1940 aa16■□□□□ 0.15
LINC00963-217ENST00000624009 CCDC191Q8NCU4 936 aa15.99■□□□□ 0.15
LINC00963-217ENST00000624009 PSMD1Q99460 953 aa15.99■□□□□ 0.15
LINC00963-217ENST00000624009 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
LINC00963-217ENST00000624009 PRELPP51888 382 aa15.98■□□□□ 0.15
LINC00963-217ENST00000624009 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC00963-217ENST00000624009 KSR2Q6VAB6 950 aa15.98■□□□□ 0.15
LINC00963-217ENST00000624009 TMC4Q7Z404 712 aa15.98■□□□□ 0.15
LINC00963-217ENST00000624009 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
LINC00963-217ENST00000624009 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
LINC00963-217ENST00000624009 KIF3CO14782 793 aa15.97■□□□□ 0.15
LINC00963-217ENST00000624009 VAMP4O75379 141 aa15.97■□□□□ 0.15
LINC00963-217ENST00000624009 BBOX1O75936 387 aa15.97■□□□□ 0.15
LINC00963-217ENST00000624009 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
LINC00963-217ENST00000624009 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
LINC00963-217ENST00000624009 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.15
LINC00963-217ENST00000624009 VPS33BQ9H267 617 aa15.96■□□□□ 0.15
LINC00963-217ENST00000624009 LRRC37AA6NMS7 1700 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 ATP5J2-PTCD1G3V325 749 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
LINC00963-217ENST00000624009 DPY19L2Q6NUT2 758 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
LINC00963-217ENST00000624009 TMX4Q9H1E5 349 aaPredicted RBP15.95■□□□□ 0.14
LINC00963-217ENST00000624009 ATP6V0A2Q9Y487 856 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 SCN4AP35499 1836 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 TAF1P21675 1872 aa15.95■□□□□ 0.14
LINC00963-217ENST00000624009 ABCC4O15439 1325 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 PI4KAP2A4QPH2 592 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 TOMM70O94826 608 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 EXOSC9Q06265 439 aaKnown RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 NEXNQ0ZGT2 675 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 PI4KAP1Q8N8J0 262 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-217ENST00000624009 CDHR2Q9BYE9 1310 aa15.94■□□□□ 0.14
LINC00963-217ENST00000624009 E9PSI1 815 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 FLIIQ13045 1269 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 GRAPQ13588 217 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 SP8Q8IXZ3 490 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
LINC00963-217ENST00000624009 ZNF428Q96B54 188 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 MYD88Q99836 296 aa15.93■□□□□ 0.14
LINC00963-217ENST00000624009 IRS4O14654 1257 aaPredicted RBP15.92■□□□□ 0.14
LINC00963-217ENST00000624009 SYNE4Q8N205 404 aa15.92■□□□□ 0.14
LINC00963-217ENST00000624009 RBM46Q8TBY0 533 aaKnown RBP15.92■□□□□ 0.14
LINC00963-217ENST00000624009 RTFDC1Q9BY42 306 aaPredicted RBP15.92■□□□□ 0.14
LINC00963-217ENST00000624009 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
LINC00963-217ENST00000624009 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms