RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 HSPA4P34932 840 aa14.8□□□□□ -0.04
LITAF-221ENST00000622633 SATB1Q01826 763 aa14.8□□□□□ -0.04
LITAF-221ENST00000622633 NCBP1Q09161 790 aaKnown RBP14.8□□□□□ -0.04
LITAF-221ENST00000622633 GUCY2CP25092 1073 aa14.79□□□□□ -0.04
LITAF-221ENST00000622633 BEND3Q5T5X7 828 aa14.79□□□□□ -0.04
LITAF-221ENST00000622633 IP6K1Q92551 441 aa14.79□□□□□ -0.04
LITAF-221ENST00000622633 NBPF20Q3BBV1 942 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 LRSAM1Q6UWE0 723 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 DNAAF4Q8WXU2 420 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 KIF1BPQ96EK5 621 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 RASSF4Q9H2L5 321 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 CTR9Q6PD62 1173 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 IL17RAQ96F46 866 aa14.78□□□□□ -0.04
LITAF-221ENST00000622633 CEMIPQ8WUJ3 1361 aa14.77□□□□□ -0.04
LITAF-221ENST00000622633 TUBGCP6Q96RT7 1819 aa14.77□□□□□ -0.04
LITAF-221ENST00000622633 SGSM2O43147 1006 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 MBD3O95983 291 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 GYS2P54840 703 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 KRT222Q8N1A0 295 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 KIF18AQ8NI77 898 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 LARP6Q9BRS8 491 aaKnown RBP14.77□□□□□ -0.05
LITAF-221ENST00000622633 GDPD2Q9HCC8 539 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 FBXO3Q9UK99 471 aa14.77□□□□□ -0.05
LITAF-221ENST00000622633 HSP90AB3PQ58FF7 597 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 MPRIPQ6WCQ1 1025 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 LRRC59Q96AG4 307 aaKnown RBP14.76□□□□□ -0.05
LITAF-221ENST00000622633 BRMS1Q9HCU9 246 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 DIAPH3Q9NSV4 1193 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 CYP2C19P33261 490 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 CWC27Q6UX04 472 aaKnown RBP14.76□□□□□ -0.05
LITAF-221ENST00000622633 RNF214Q8ND24 703 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 CCDC9Q9Y3X0 531 aaKnown RBP14.76□□□□□ -0.05
LITAF-221ENST00000622633 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
LITAF-221ENST00000622633 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
LITAF-221ENST00000622633 GADD45BO75293 160 aaPredicted RBP14.75□□□□□ -0.05
LITAF-221ENST00000622633 TEFQ10587 303 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 OS9Q13438 667 aaPredicted RBP14.75□□□□□ -0.05
LITAF-221ENST00000622633 ZNF530Q6P9A1 599 aaPredicted RBP14.75□□□□□ -0.05
LITAF-221ENST00000622633 CREBRFQ8IUR6 639 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 CNTROBQ8N137 903 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 NFATC2IPQ8NCF5 419 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 LSG1Q9H089 658 aaKnown RBP14.75□□□□□ -0.05
LITAF-221ENST00000622633 SH3BP1Q9Y3L3 701 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 PLCD4Q9BRC7 762 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 SPG7Q9UQ90 795 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 RAD50Q92878 1312 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 CACNA1FO60840 1977 aa14.75□□□□□ -0.05
LITAF-221ENST00000622633 EPB41L2O43491 1005 aaKnown RBP14.74□□□□□ -0.05
LITAF-221ENST00000622633 GPATCH11Q8N954 259 aa14.74□□□□□ -0.05
LITAF-221ENST00000622633 FAM53CQ9NYF3 392 aa14.74□□□□□ -0.05
LITAF-221ENST00000622633 PSME1Q06323 249 aa14.74□□□□□ -0.05
LITAF-221ENST00000622633 SYCP1Q15431 976 aa14.74□□□□□ -0.05
LITAF-221ENST00000622633 RNF217Q8TC41 542 aa14.74□□□□□ -0.05
LITAF-221ENST00000622633 HOXB7P09629 217 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 USP48Q86UV5 1035 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 MPNDQ8N594 471 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 WDR33Q9C0J8 1336 aaKnown RBP14.73□□□□□ -0.05
LITAF-221ENST00000622633 ADCY9O60503 1353 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 AK2P54819 239 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 SEMA3FQ13275 785 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 ESCO1Q5FWF5 840 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 DONSONQ9NYP3 566 aa14.73□□□□□ -0.05
LITAF-221ENST00000622633 CPA1P15085 419 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 PROSER3Q2NL68 480 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 HSP90AB4PQ58FF6 505 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 AKAP4Q5JQC9 854 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 TTC14Q96N46 770 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 ZNF446Q9NWS9 450 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 MAP3K2Q9Y2U5 619 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 SETD1BQ9UPS6 1966 aaKnown RBP14.72□□□□□ -0.05
LITAF-221ENST00000622633 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 PLEKHO1Q53GL0 409 aaPredicted RBP14.72□□□□□ -0.05
LITAF-221ENST00000622633 RUFY3Q7L099 469 aa14.72□□□□□ -0.05
LITAF-221ENST00000622633 TTC12Q9H892 705 aaPredicted RBP14.72□□□□□ -0.05
LITAF-221ENST00000622633 C9orf78Q9NZ63 289 aaPredicted RBP14.72□□□□□ -0.05
LITAF-221ENST00000622633 PA2G4Q9UQ80 394 aaKnown RBP14.72□□□□□ -0.05
LITAF-221ENST00000622633 CASQ1P31415 396 aa14.71□□□□□ -0.05
LITAF-221ENST00000622633 RPAP1Q9BWH6 1393 aaPredicted RBP14.71□□□□□ -0.05
LITAF-221ENST00000622633 GOLIM4O00461 696 aa14.71□□□□□ -0.05
LITAF-221ENST00000622633 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
LITAF-221ENST00000622633 DTNBO60941 627 aa14.71□□□□□ -0.05
LITAF-221ENST00000622633 GLRX3O76003 335 aaKnown RBP14.71□□□□□ -0.05
LITAF-221ENST00000622633 TSPY26PQ9H489 355 aa14.71□□□□□ -0.05
LITAF-221ENST00000622633 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
LITAF-221ENST00000622633 PRAMEF22A3QJZ6 481 aa14.7□□□□□ -0.06
LITAF-221ENST00000622633 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 TSGA10IPQ3SY00 556 aa14.7□□□□□ -0.06
LITAF-221ENST00000622633 DNAJC21Q5F1R6 531 aaKnown RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 CLASRPQ8N2M8 674 aaKnown RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 ST7Q9NRC1 585 aa14.7□□□□□ -0.06
LITAF-221ENST00000622633 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
LITAF-221ENST00000622633 N4BP2Q86UW6 1770 aaPredicted RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 USP42Q9H9J4 1324 aaKnown RBP14.7□□□□□ -0.06
LITAF-221ENST00000622633 TRIM66O15016 1216 aa14.7□□□□□ -0.06
LITAF-221ENST00000622633 PTH1RQ03431 593 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms