RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 ADCK5Q3MIX3 580 aa25.7■■□□□ 1.71
PCSK6-220ENST00000622483 CALCOCO1Q9P1Z2 691 aa25.7■■□□□ 1.71
PCSK6-220ENST00000622483 RGPD8O14715 1765 aaPredicted RBP25.7■■□□□ 1.71
PCSK6-220ENST00000622483 CEBPZQ03701 1054 aaKnown RBP25.7■■□□□ 1.7
PCSK6-220ENST00000622483 MAP3K19Q56UN5 1328 aa25.7■■□□□ 1.7
PCSK6-220ENST00000622483 SKILP12757 684 aa25.7■■□□□ 1.7
PCSK6-220ENST00000622483 EIF4A2Q14240 407 aaKnown RBP25.69■■□□□ 1.7
PCSK6-220ENST00000622483 ERCC4Q92889 916 aaPredicted RBP25.69■■□□□ 1.7
PCSK6-220ENST00000622483 USP6P35125 1406 aa25.69■■□□□ 1.7
PCSK6-220ENST00000622483 CABLES1Q8TDN4 633 aa25.68■■□□□ 1.7
PCSK6-220ENST00000622483 LARP1BQ659C4 914 aaKnown RBP25.68■■□□□ 1.7
PCSK6-220ENST00000622483 JAKMIP1Q96N16 626 aaKnown RBP25.68■■□□□ 1.7
PCSK6-220ENST00000622483 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
PCSK6-220ENST00000622483 NR1I2O75469 434 aa25.67■■□□□ 1.7
PCSK6-220ENST00000622483 GNAI2P04899 355 aa25.67■■□□□ 1.7
PCSK6-220ENST00000622483 BICD2Q8TD16 824 aa25.67■■□□□ 1.7
PCSK6-220ENST00000622483 TTC14Q96N46 770 aa25.67■■□□□ 1.7
PCSK6-220ENST00000622483 IL13P35225 146 aa25.67■■□□□ 1.7
PCSK6-220ENST00000622483 SYCP1Q15431 976 aa25.66■■□□□ 1.7
PCSK6-220ENST00000622483 USP32Q8NFA0 1604 aa25.66■■□□□ 1.7
PCSK6-220ENST00000622483 PLA2G4DQ86XP0 818 aa25.66■■□□□ 1.7
PCSK6-220ENST00000622483 LRRC8AQ8IWT6 810 aa25.66■■□□□ 1.7
PCSK6-220ENST00000622483 STK3Q13188 491 aa25.66■■□□□ 1.7
PCSK6-220ENST00000622483 CHMP4CQ96CF2 233 aa25.66■■□□□ 1.7
PCSK6-220ENST00000622483 FOSBP53539 338 aa25.65■■□□□ 1.7
PCSK6-220ENST00000622483 PRPF40BQ6NWY9 871 aaKnown RBP25.65■■□□□ 1.7
PCSK6-220ENST00000622483 LRRFIP2Q9Y608 721 aaKnown RBP25.65■■□□□ 1.7
PCSK6-220ENST00000622483 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.7
PCSK6-220ENST00000622483 DIP2AQ14689 1571 aa25.64■■□□□ 1.7
PCSK6-220ENST00000622483 KRT85P78386 507 aa25.64■■□□□ 1.7
PCSK6-220ENST00000622483 ZCCHC17Q9NP64 241 aaKnown RBP25.64■■□□□ 1.7
PCSK6-220ENST00000622483 TNNT3P45378 269 aaPredicted RBP25.64■■□□□ 1.69
PCSK6-220ENST00000622483 ZC3H6P61129 1189 aaKnown RBP25.63■■□□□ 1.69
PCSK6-220ENST00000622483 RAD51AP2Q09MP3 1159 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 ME3Q16798 604 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 SALL3Q9BXA9 1300 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 ERBB3P21860 1342 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 ST3GAL1Q11201 340 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 DDX11Q96FC9 970 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 PDRG1Q9NUG6 133 aa25.63■■□□□ 1.69
PCSK6-220ENST00000622483 CCDC69A6NI79 296 aa25.62■■□□□ 1.69
PCSK6-220ENST00000622483 SPATA32Q96LK8 384 aa25.62■■□□□ 1.69
PCSK6-220ENST00000622483 HYPKQ9NX55 129 aa25.62■■□□□ 1.69
PCSK6-220ENST00000622483 ATF3P18847 181 aa25.62■■□□□ 1.69
PCSK6-220ENST00000622483 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
PCSK6-220ENST00000622483 GOLGA6L19H0YKK7 550 aa25.61■■□□□ 1.69
PCSK6-220ENST00000622483 FEZ2Q9UHY8 353 aaPredicted RBP25.61■■□□□ 1.69
PCSK6-220ENST00000622483 TMEM94Q12767 1356 aa25.61■■□□□ 1.69
PCSK6-220ENST00000622483 EPC1Q9H2F5 836 aa25.61■■□□□ 1.69
PCSK6-220ENST00000622483 C11orf57Q6ZUT1 292 aaPredicted RBP25.61■■□□□ 1.69
PCSK6-220ENST00000622483 PPFIA3O75145 1194 aa25.6■■□□□ 1.69
PCSK6-220ENST00000622483 SLU7O95391 586 aaKnown RBP25.6■■□□□ 1.69
PCSK6-220ENST00000622483 PTH1RQ03431 593 aa25.6■■□□□ 1.69
PCSK6-220ENST00000622483 CDC42BPGQ6DT37 1551 aa25.6■■□□□ 1.69
PCSK6-220ENST00000622483 CLCN6P51797 869 aa25.6■■□□□ 1.69
PCSK6-220ENST00000622483 MAP2P11137 1827 aaKnown RBP25.6■■□□□ 1.69
PCSK6-220ENST00000622483 TULP2O00295 520 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 SGSM2O43147 1006 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 SEC31AO94979 1220 aaKnown RBP25.59■■□□□ 1.69
PCSK6-220ENST00000622483 CYP2C19P33261 490 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 GYS2P54840 703 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 SYT10Q6XYQ8 523 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 ERO1AQ96HE7 468 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 SURF6O75683 361 aaKnown RBP25.59■■□□□ 1.69
PCSK6-220ENST00000622483 ST5P78524 1137 aa25.59■■□□□ 1.69
PCSK6-220ENST00000622483 LSG1Q9H089 658 aaKnown RBP25.59■■□□□ 1.69
PCSK6-220ENST00000622483 TRIM66O15016 1216 aa25.58■■□□□ 1.69
PCSK6-220ENST00000622483 KIF24Q5T7B8 1368 aa25.58■■□□□ 1.69
PCSK6-220ENST00000622483 ARHGAP29Q52LW3 1261 aa25.58■■□□□ 1.69
PCSK6-220ENST00000622483 C10orf67Q8IYJ2 551 aa25.58■■□□□ 1.69
PCSK6-220ENST00000622483 LRRC59Q96AG4 307 aaKnown RBP25.57■■□□□ 1.68
PCSK6-220ENST00000622483 TPCN1Q9ULQ1 816 aa25.57■■□□□ 1.68
PCSK6-220ENST00000622483 FHOD1Q9Y613 1164 aa25.57■■□□□ 1.68
PCSK6-220ENST00000622483 NYAP1Q6ZVC0 841 aa25.56■■□□□ 1.68
PCSK6-220ENST00000622483 RSPH14Q9UHP6 348 aa25.56■■□□□ 1.68
PCSK6-220ENST00000622483 BECN2A8MW95 431 aa25.55■■□□□ 1.68
PCSK6-220ENST00000622483 TDRD7Q8NHU6 1098 aaKnown RBP25.55■■□□□ 1.68
PCSK6-220ENST00000622483 BMS1Q14692 1282 aaKnown RBP25.55■■□□□ 1.68
PCSK6-220ENST00000622483 KRBA2Q6ZNG9 492 aa25.55■■□□□ 1.68
PCSK6-220ENST00000622483 KIF1BPQ96EK5 621 aa25.55■■□□□ 1.68
PCSK6-220ENST00000622483 PTPRCP08575 1304 aa25.55■■□□□ 1.68
PCSK6-220ENST00000622483 PNMA6AP0CW24 399 aaPredicted RBP25.54■■□□□ 1.68
PCSK6-220ENST00000622483 PLA2G4AP47712 749 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 LARP1Q6PKG0 1096 aaKnown RBP25.54■■□□□ 1.68
PCSK6-220ENST00000622483 C19orf44Q9H6X5 657 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 KIAA0232Q92628 1395 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 KRT28Q7Z3Y7 464 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 CCAR2Q8N163 923 aaKnown RBP25.54■■□□□ 1.68
PCSK6-220ENST00000622483 CCDC34Q96HJ3 373 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 LCMT1Q9UIC8 334 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 PGBD1Q96JS3 809 aa25.54■■□□□ 1.68
PCSK6-220ENST00000622483 EYA1Q99502 592 aa25.53■■□□□ 1.68
PCSK6-220ENST00000622483 CHL1O00533 1208 aa25.53■■□□□ 1.68
PCSK6-220ENST00000622483 IFIT2P09913 472 aaKnown RBP25.53■■□□□ 1.68
PCSK6-220ENST00000622483 FTOQ9C0B1 505 aaKnown RBP eCLIP25.53■■□□□ 1.684e-8■□□□□ 8.9
PCSK6-220ENST00000622483 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.53■■□□□ 1.68
PCSK6-220ENST00000622483 CCDC171Q6TFL3 1326 aa25.53■■□□□ 1.68
PCSK6-220ENST00000622483 LEO1Q8WVC0 666 aaPredicted RBP25.52■■□□□ 1.68
PCSK6-220ENST00000622483 TSPYL4Q9UJ04 414 aa25.52■■□□□ 1.68
PCSK6-220ENST00000622483 IRX3P78415 501 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms