RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 SYNE4Q8N205 404 aa23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 SSH3Q8TE77 659 aa23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 AK7Q96M32 723 aa23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 SRP68Q9UHB9 627 aaKnown RBP23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 EXOC6BQ9Y2D4 811 aa23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 RTCBQ9Y3I0 505 aaKnown RBP23.18■■□□□ 1.3
SEMA6C-210ENST00000621728 PDE4AP27815 886 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 NUCB1Q02818 461 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 POLA2Q14181 598 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 HSP90AB3PQ58FF7 597 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 ZNF34Q8IZ26 560 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 LNPKQ9C0E8 428 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
SEMA6C-210ENST00000621728 FAM89AQ96GI7 184 aa23.16■■□□□ 1.3
SEMA6C-210ENST00000621728 PLSCR1O15162 318 aa23.15■■□□□ 1.3
SEMA6C-210ENST00000621728 MTX1Q13505 466 aa23.15■■□□□ 1.3
SEMA6C-210ENST00000621728 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
SEMA6C-210ENST00000621728 FAM177BA6PVY3 158 aa23.14■■□□□ 1.3
SEMA6C-210ENST00000621728 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.3
SEMA6C-210ENST00000621728 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.3
SEMA6C-210ENST00000621728 CHD1LQ86WJ1 897 aa23.14■■□□□ 1.3
SEMA6C-210ENST00000621728 BCL2L12Q9HB09 334 aa23.14■■□□□ 1.3
SEMA6C-210ENST00000621728 FOXO4P98177 505 aa23.14■■□□□ 1.29
SEMA6C-210ENST00000621728 HDAC5Q9UQL6 1122 aa23.14■■□□□ 1.29
SEMA6C-210ENST00000621728 PA2G4Q9UQ80 394 aaKnown RBP23.13■■□□□ 1.29
SEMA6C-210ENST00000621728 PCCAP05165 728 aaPredicted RBP23.12■■□□□ 1.29
SEMA6C-210ENST00000621728 SUSD4Q5VX71 490 aa23.12■■□□□ 1.29
SEMA6C-210ENST00000621728 NARFQ9UHQ1 456 aa23.12■■□□□ 1.29
SEMA6C-210ENST00000621728 NIP7Q9Y221 180 aaKnown RBP eCLIP23.12■■□□□ 1.29
SEMA6C-210ENST00000621728 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
SEMA6C-210ENST00000621728 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
SEMA6C-210ENST00000621728 TRMT112Q9UI30 125 aaKnown RBP23.11■■□□□ 1.29
SEMA6C-210ENST00000621728 SURF6O75683 361 aaKnown RBP23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 TRAPPC3LQ5T215 181 aa23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 BICDL1Q6ZP65 573 aa23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 ZNF652Q9Y2D9 606 aa23.1■■□□□ 1.29
SEMA6C-210ENST00000621728 ZPR1O75312 459 aa23.09■■□□□ 1.29
SEMA6C-210ENST00000621728 TBC1D9BQ66K14 1250 aa23.09■■□□□ 1.29
SEMA6C-210ENST00000621728 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
SEMA6C-210ENST00000621728 TUBGCP6Q96RT7 1819 aa23.09■■□□□ 1.29
SEMA6C-210ENST00000621728 RGPD3A6NKT7 1758 aaPredicted RBP23.08■■□□□ 1.29
SEMA6C-210ENST00000621728 RGPD4Q7Z3J3 1758 aa23.08■■□□□ 1.29
SEMA6C-210ENST00000621728 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.28
SEMA6C-210ENST00000621728 RFC4P35249 363 aa23.08■■□□□ 1.28
SEMA6C-210ENST00000621728 EN1Q05925 392 aaPredicted RBP23.08■■□□□ 1.28
SEMA6C-210ENST00000621728 CLEC4GQ6UXB4 293 aa23.08■■□□□ 1.28
SEMA6C-210ENST00000621728 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.28
SEMA6C-210ENST00000621728 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
SEMA6C-210ENST00000621728 RFX5P48382 616 aaPredicted RBP23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 EZH2Q15910 746 aaKnown RBP23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 CDHR2Q9BYE9 1310 aa23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 IRS4O14654 1257 aaPredicted RBP23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 NTSR2O95665 410 aa23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 ANP32EQ9BTT0 268 aa23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 SIL1Q9H173 461 aa23.06■■□□□ 1.28
SEMA6C-210ENST00000621728 PARP10Q53GL7 1025 aa23.05■■□□□ 1.28
SEMA6C-210ENST00000621728 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
SEMA6C-210ENST00000621728 UTP14AQ9BVJ6 771 aaKnown RBP23.05■■□□□ 1.28
SEMA6C-210ENST00000621728 DDX60Q8IY21 1712 aaKnown RBP23.05■■□□□ 1.28
SEMA6C-210ENST00000621728 MYH3P11055 1940 aa23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 AKT1S1Q96B36 256 aa23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 HCLS1P14317 486 aaPredicted RBP23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 CAMKK2Q96RR4 588 aa23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 LRRCC1Q9C099 1032 aa23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 IL1RAPL2Q9NP60 686 aa23.04■■□□□ 1.28
SEMA6C-210ENST00000621728 ADRA2BP18089 450 aa23.03■■□□□ 1.28
SEMA6C-210ENST00000621728 SSFA2P28290 1259 aa23.03■■□□□ 1.28
SEMA6C-210ENST00000621728 PLA2G12BQ9BX93 195 aa23.03■■□□□ 1.28
SEMA6C-210ENST00000621728 COL24A1Q17RW2 1714 aa23.03■■□□□ 1.28
SEMA6C-210ENST00000621728 SH3TC1Q8TE82 1336 aa23.03■■□□□ 1.28
SEMA6C-210ENST00000621728 PTPN12Q05209 780 aaKnown RBP23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 OS9Q13438 667 aaPredicted RBP23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 ZBTB47Q9UFB7 747 aaPredicted RBP23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 RHPN1Q8TCX5 695 aa23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 ZNF594Q96JF6 807 aaPredicted RBP23.02■■□□□ 1.28
SEMA6C-210ENST00000621728 LAMB2P55268 1798 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 RGL2O15211 777 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 RAB11FIP3O75154 756 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 CSF1RP07333 972 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 GYS1P13807 737 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 CTSWP56202 376 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 ERFEQ4G0M1 354 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 TTLL11Q8NHH1 800 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 SETDB2Q96T68 719 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 COPRSQ9NQ92 184 aa23■■□□□ 1.27
SEMA6C-210ENST00000621728 PDE8AO60658 829 aa22.99■■□□□ 1.27
SEMA6C-210ENST00000621728 SASH1O94885 1247 aa22.99■■□□□ 1.27
SEMA6C-210ENST00000621728 PLEKHM2Q8IWE5 1019 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms