RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 BAG3O95817 575 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 POLD1P28340 1107 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 PDE1AP54750 535 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 ARHGAP45Q92619 1136 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 USP16Q9Y5T5 823 aa11.91□□□□□ -0.5
SMARCA1-205ENST00000617310 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 GDPD2Q9HCC8 539 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 SEC63Q9UGP8 760 aaKnown RBP11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 ADGRL2O95490 1459 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 MAST1Q9Y2H9 1570 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 ATP8B2P98198 1209 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 SBNO2Q9Y2G9 1366 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 TFCP2Q12800 502 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
SMARCA1-205ENST00000617310 MBD3O95983 291 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 NAA16Q6N069 864 aaPredicted RBP11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 STK32BQ9NY57 414 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 ZSCAN31Q96LW9 406 aaPredicted RBP11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 PTPRTO14522 1441 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 TTC22Q5TAA0 569 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 SPC24Q8NBT2 197 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 BRF1Q92994 677 aa11.89□□□□□ -0.51
SMARCA1-205ENST00000617310 TAF5LO75529 589 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 SLC4A4Q9Y6R1 1079 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 CEP85Q6P2H3 762 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 IL17REQ8NFR9 667 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 JDP2Q8WYK2 163 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 TNMDQ9H2S6 317 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 RNF41Q9H4P4 317 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 TTF1Q15361 905 aaPredicted RBP11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 MFSD6Q6ZSS7 791 aa11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-205ENST00000617310 CAMK4Q16566 473 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 NAT10Q9H0A0 1025 aaKnown RBP11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 CHL1O00533 1208 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 NYXQ9GZU5 481 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 CABP5Q9NP86 173 aa11.87□□□□□ -0.51
SMARCA1-205ENST00000617310 CRNKL1Q9BZJ0 848 aaKnown RBP11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 TANGO6Q9C0B7 1094 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 USP19O94966 1318 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 MYO1BO43795 1136 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 ITGA6P23229 1130 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 CATIPQ7Z7H3 387 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 CCDC87Q9NVE4 849 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 NLRP5P59047 1200 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 PDE4BQ07343 736 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 SPTY2D1Q68D10 685 aaPredicted RBP11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 DTNBO60941 627 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
SMARCA1-205ENST00000617310 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 UFL1O94874 794 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 NUCB1Q02818 461 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 KLHL10Q6JEL2 608 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 ORC3Q9UBD5 711 aaPredicted RBP11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 LIMCH1Q9UPQ0 1083 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 TRIM37O94972 964 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 SERPINC1P01008 464 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 PAG1Q9NWQ8 432 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 PIK3C2GO75747 1445 aa11.85□□□□□ -0.51
SMARCA1-205ENST00000617310 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
SMARCA1-205ENST00000617310 MAGEB6Q8N7X4 407 aa11.84□□□□□ -0.51
SMARCA1-205ENST00000617310 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
SMARCA1-205ENST00000617310 TBC1D2Q9BYX2 928 aa11.84□□□□□ -0.51
SMARCA1-205ENST00000617310 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
SMARCA1-205ENST00000617310 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms