RNA–Protein interactions for RNA: ENST00000614059.4

RPS6KC1-208, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-208ENST00000614059 NAPBQ9H115 298 aa16.19■□□□□ 0.18
RPS6KC1-208ENST00000614059 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 NEMFO60524 1076 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 BMS1Q14692 1282 aaKnown RBP16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 CCDC12Q8WUD4 166 aaPredicted RBP16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 FAM135AQ9P2D6 1515 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 MARCKSP29966 332 aaPredicted RBP16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 GAS2L3Q86XJ1 694 aa16.18■□□□□ 0.18
RPS6KC1-208ENST00000614059 RBM25P49756 843 aaKnown RBP16.17■□□□□ 0.18
RPS6KC1-208ENST00000614059 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
RPS6KC1-208ENST00000614059 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
RPS6KC1-208ENST00000614059 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
RPS6KC1-208ENST00000614059 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 IPO4Q8TEX9 1081 aaKnown RBP16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 SEPT11Q9NVA2 429 aaKnown RBP16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 NEFHP12036 1026 aa16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■□□ 17.1
RPS6KC1-208ENST00000614059 UBASH3AP57075 661 aa16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 ANAPC15P60006 121 aa16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 CCDC148Q8NFR7 591 aa16.16■□□□□ 0.18
RPS6KC1-208ENST00000614059 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 CHMLP26374 656 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 GNL3LQ9NVN8 582 aaKnown RBP16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 RANBP6O60518 1105 aaKnown RBP16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 ATP8B2P98198 1209 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 PKP1Q13835 747 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 LUC7LQ9NQ29 371 aaKnown RBP16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 MBD5Q9P267 1494 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 GOLGA8AA7E2F4 631 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 GPTP24298 496 aa16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
RPS6KC1-208ENST00000614059 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 USP5P45974 858 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 G2E3Q7L622 706 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 GBP3Q9H0R5 595 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 SLC12A7Q9Y666 1083 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 HS1BP3Q53T59 392 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 TMEM63CQ9P1W3 806 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 KLF18A0A0U1RQI7 1052 aa16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 GADD45BO75293 160 aaPredicted RBP16.14■□□□□ 0.17
RPS6KC1-208ENST00000614059 PHACTR2O75167 634 aa16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 CCDC102BQ68D86 513 aa16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 WASF1Q92558 559 aa16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 SMARCC1Q92922 1105 aaPredicted RBP16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 CCDC94Q9BW85 323 aaPredicted RBP16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 U2AF2P26368 475 aaKnown RBP eCLIP16.13■□□□□ 0.179e-8■■■■□ 20.8
RPS6KC1-208ENST00000614059 Q6ZUG5 572 aa16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 FAM107BQ9H098 131 aa16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 COL17A1Q9UMD9 1497 aaPredicted RBP16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 SYKP43405 635 aa16.13■□□□□ 0.17
RPS6KC1-208ENST00000614059 SPA17Q15506 151 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 ACEP12821 1306 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 A2MP01023 1474 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 NPHP3Q7Z494 1330 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 SYCP1Q15431 976 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 SLC39A6Q13433 755 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 BBXQ8WY36 941 aaPredicted RBP16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 MYO6Q9UM54 1294 aa16.12■□□□□ 0.17
RPS6KC1-208ENST00000614059 ERLIN2O94905 339 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 SLU7O95391 586 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 LMBRD1Q9NUN5 540 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 AFMP43652 599 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 NMIQ13287 307 aaPredicted RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 CCDC113Q9H0I3 377 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 ARFGAP3Q9NP61 516 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 EIF4A2Q14240 407 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 TDRD12Q587J7 1177 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 GTF3C6Q969F1 213 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
RPS6KC1-208ENST00000614059 CAVIN2O95810 425 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 SLC4A8Q2Y0W8 1093 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 HYPKQ9NX55 129 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 N4BP3O15049 544 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 CEBPAP49715 358 aaPredicted RBP16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 TAF4BQ92750 862 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 BCCIPQ9P287 314 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
RPS6KC1-208ENST00000614059 IFNKQ9P0W0 207 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms