RNA–Protein interactions for RNA: ENST00000613919.4

SEM1-214, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 610 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-214ENST00000613919 NUP98P52948 1817 aa11.88□□□□□ -0.51
SEM1-214ENST00000613919 DDNO94850 711 aaPredicted RBP11.88□□□□□ -0.51
SEM1-214ENST00000613919 HOXA10P31260 410 aaPredicted RBP11.88□□□□□ -0.51
SEM1-214ENST00000613919 HTRA3P83110 453 aa11.88□□□□□ -0.51
SEM1-214ENST00000613919 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
SEM1-214ENST00000613919 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
SEM1-214ENST00000613919 RTKN2Q8IZC4 609 aa11.88□□□□□ -0.51
SEM1-214ENST00000613919 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
SEM1-214ENST00000613919 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
SEM1-214ENST00000613919 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 HOXB7P09629 217 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 DNAJC5GQ8N7S2 189 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 SMC1BQ8NDV3 1235 aa11.87□□□□□ -0.51
SEM1-214ENST00000613919 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
SEM1-214ENST00000613919 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
SEM1-214ENST00000613919 TCIRG1Q13488 830 aa11.86□□□□□ -0.51
SEM1-214ENST00000613919 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
SEM1-214ENST00000613919 ZNF428Q96B54 188 aa11.86□□□□□ -0.51
SEM1-214ENST00000613919 RBM17Q96I25 401 aaKnown RBP11.86□□□□□ -0.51
SEM1-214ENST00000613919 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
SEM1-214ENST00000613919 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
SEM1-214ENST00000613919 CCDC88AQ3V6T2 1871 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
SEM1-214ENST00000613919 HCLS1P14317 486 aaPredicted RBP11.85□□□□□ -0.51
SEM1-214ENST00000613919 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
SEM1-214ENST00000613919 IARSP41252 1262 aaKnown RBP11.85□□□□□ -0.51
SEM1-214ENST00000613919 HSP90AB3PQ58FF7 597 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 SLC10A5Q5PT55 438 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 NLRP3Q96P20 1036 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 PSMD1Q99460 953 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
SEM1-214ENST00000613919 WDR90Q96KV7 1748 aa11.85□□□□□ -0.51
SEM1-214ENST00000613919 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
SEM1-214ENST00000613919 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
SEM1-214ENST00000613919 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
SEM1-214ENST00000613919 GNAI1P63096 354 aa11.84□□□□□ -0.51
SEM1-214ENST00000613919 CC2D2BQ6DHV5 1058 aa11.84□□□□□ -0.51
SEM1-214ENST00000613919 PLBD2Q8NHP8 589 aa11.84□□□□□ -0.51
SEM1-214ENST00000613919 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
SEM1-214ENST00000613919 RNF123Q5XPI4 1314 aa11.84□□□□□ -0.51
SEM1-214ENST00000613919 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
SEM1-214ENST00000613919 ANKRD13DQ6ZTN6 518 aa11.83□□□□□ -0.52
SEM1-214ENST00000613919 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
SEM1-214ENST00000613919 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
SEM1-214ENST00000613919 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
SEM1-214ENST00000613919 ABCC4O15439 1325 aa11.83□□□□□ -0.52
SEM1-214ENST00000613919 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
SEM1-214ENST00000613919 COL4A5P29400 1685 aa11.82□□□□□ -0.52
SEM1-214ENST00000613919 ATP5J2-PTCD1G3V325 749 aa11.82□□□□□ -0.52
SEM1-214ENST00000613919 FZD9O00144 591 aa11.82□□□□□ -0.52
SEM1-214ENST00000613919 C8orf58Q8NAV2 365 aa11.82□□□□□ -0.52
SEM1-214ENST00000613919 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
SEM1-214ENST00000613919 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
SEM1-214ENST00000613919 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
SEM1-214ENST00000613919 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
SEM1-214ENST00000613919 JDP2Q8WYK2 163 aa11.81□□□□□ -0.52
SEM1-214ENST00000613919 TAF1DQ9H5J8 278 aaPredicted RBP11.81□□□□□ -0.52
SEM1-214ENST00000613919 PHAXQ9H814 394 aaKnown RBP11.81□□□□□ -0.52
SEM1-214ENST00000613919 ATP6V0A2Q9Y487 856 aa11.81□□□□□ -0.52
SEM1-214ENST00000613919 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
SEM1-214ENST00000613919 LARGE2Q8N3Y3 721 aa11.8□□□□□ -0.52
SEM1-214ENST00000613919 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
SEM1-214ENST00000613919 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
SEM1-214ENST00000613919 KLRG1Q96E93 195 aa11.8□□□□□ -0.52
SEM1-214ENST00000613919 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
SEM1-214ENST00000613919 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 BBOX1O75936 387 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 AOC3Q16853 763 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
SEM1-214ENST00000613919 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
SEM1-214ENST00000613919 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 GPC2Q8N158 579 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 MRS2Q9HD23 443 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 HACL1Q9UJ83 578 aa11.79□□□□□ -0.52
SEM1-214ENST00000613919 PPIP5K2O43314 1243 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 ANP32CO43423 234 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 EPHX2P34913 555 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 EIF6P56537 245 aaKnown RBP11.78□□□□□ -0.52
SEM1-214ENST00000613919 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
SEM1-214ENST00000613919 GRAPQ13588 217 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
SEM1-214ENST00000613919 LDHDQ86WU2 507 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
SEM1-214ENST00000613919 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
SEM1-214ENST00000613919 GJA3Q9Y6H8 435 aa11.78□□□□□ -0.52
SEM1-214ENST00000613919 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
SEM1-214ENST00000613919 CCDC30Q5VVM6 783 aa11.77□□□□□ -0.53
SEM1-214ENST00000613919 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
SEM1-214ENST00000613919 NIM1KQ8IY84 436 aa11.77□□□□□ -0.53
SEM1-214ENST00000613919 JMYQ8N9B5 988 aa11.77□□□□□ -0.53
SEM1-214ENST00000613919 MYD88Q99836 296 aa11.77□□□□□ -0.53
SEM1-214ENST00000613919 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
SEM1-214ENST00000613919 LAMB2P55268 1798 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms