RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 SPON1Q9HCB6 807 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 HMX1Q9NP08 348 aaPredicted RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 PARD3Q8TEW0 1356 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 CCER2I3L3R5 266 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 TMPOP42166 694 aaKnown RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 ZBTB3Q9H5J0 574 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 RTCBQ9Y3I0 505 aaKnown RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 KDM6AO15550 1401 aaPredicted RBP6.41□□□□□ -1.38
SYCP1-209ENST00000613524 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.41□□□□□ -1.38
SYCP1-209ENST00000613524 MAP3K5Q99683 1374 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 ZNF790Q6PG37 636 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 MS4A3Q96HJ5 214 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 FHDC1Q9C0D6 1143 aaPredicted RBP6.41□□□□□ -1.38
SYCP1-209ENST00000613524 DOT1LQ8TEK3 1739 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 THSD7AQ9UPZ6 1657 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 PLSCR1O15162 318 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 HNRNPUQ00839 825 aaKnown RBP eCLIP6.41□□□□□ -1.38
SYCP1-209ENST00000613524 NFE2L2Q16236 605 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 HDGFL1Q5TGJ6 251 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 USPL1Q5W0Q7 1092 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 GPCPD1Q9NPB8 672 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 PCDHB15Q9Y5E8 787 aa6.41□□□□□ -1.38
SYCP1-209ENST00000613524 GTF2E1P29083 439 aaPredicted RBP6.4□□□□□ -1.38
SYCP1-209ENST00000613524 GPR162Q16538 588 aa6.4□□□□□ -1.38
SYCP1-209ENST00000613524 CCDC27Q2M243 656 aa6.4□□□□□ -1.38
SYCP1-209ENST00000613524 TRAPPC3LQ5T215 181 aa6.4□□□□□ -1.38
SYCP1-209ENST00000613524 EPS8L1Q8TE68 723 aa6.4□□□□□ -1.38
SYCP1-209ENST00000613524 SMARCC1Q92922 1105 aaPredicted RBP6.4□□□□□ -1.38
SYCP1-209ENST00000613524 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.38
SYCP1-209ENST00000613524 ZPR1O75312 459 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 MMP10P09238 476 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 FOXK1P85037 733 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 VAC14Q08AM6 782 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 NLGN2Q8NFZ4 835 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 HLA-CQ95604 372 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 ANP32EQ9BTT0 268 aa6.4□□□□□ -1.39
SYCP1-209ENST00000613524 POLD1P28340 1107 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 CLK2P49760 499 aaKnown RBP6.39□□□□□ -1.39
SYCP1-209ENST00000613524 TAGLNQ01995 201 aaKnown RBP6.39□□□□□ -1.39
SYCP1-209ENST00000613524 RUNDC1Q96C34 613 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 BTAF1O14981 1849 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 PNPLA7Q6ZV29 1317 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 ERVV-2B6SEH9 535 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 GPR37L1O60883 481 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 TMUB1Q9BVT8 246 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
SYCP1-209ENST00000613524 MAP3K7O43318 606 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 TAF7Q15545 349 aaPredicted RBP6.39□□□□□ -1.39
SYCP1-209ENST00000613524 FMNL2Q96PY5 1086 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 TBC1D2Q9BYX2 928 aa6.39□□□□□ -1.39
SYCP1-209ENST00000613524 FAM217BQ9NTX9 383 aaPredicted RBP6.39□□□□□ -1.39
SYCP1-209ENST00000613524 BCL9O00512 1426 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 FAM208AQ9UK61 1670 aaKnown RBP6.38□□□□□ -1.39
SYCP1-209ENST00000613524 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 NOM1Q5C9Z4 860 aaKnown RBP6.38□□□□□ -1.39
SYCP1-209ENST00000613524 KIF24Q5T7B8 1368 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 A0A0G2JLW4 131 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 STARD3NLO95772 234 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 NDUFV2P19404 249 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 TMC2Q8TDI7 906 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 CDCA7LQ96GN5 454 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 PLEKHF1Q96S99 279 aa6.38□□□□□ -1.39
SYCP1-209ENST00000613524 PARP4Q9UKK3 1724 aaKnown RBP6.38□□□□□ -1.39
SYCP1-209ENST00000613524 SPDYE5A6NIY4 337 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 ATP5J2-PTCD1G3V325 749 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 CHRNA5P30532 468 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 NUTM1Q86Y26 1132 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 TSPYL6Q8N831 410 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 CCDC87Q9NVE4 849 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 BCS1LQ9Y276 419 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 ANKRD26Q9UPS8 1709 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 KDRP35968 1356 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 AP1G2O75843 785 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 SLC27A3Q5K4L6 730 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 TTLL7Q6ZT98 887 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 METTL3Q86U44 580 aaKnown RBP6.37□□□□□ -1.39
SYCP1-209ENST00000613524 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
SYCP1-209ENST00000613524 UCN2Q96RP3 112 aa6.37□□□□□ -1.39
SYCP1-209ENST00000613524 DZIP3Q86Y13 1208 aaKnown RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 FAM177A1Q8N128 213 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 ZNF622Q969S3 477 aaKnown RBP eCLIP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 PNNQ9H307 717 aaKnown RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 TRIM35Q9UPQ4 493 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 COL3A1P02461 1466 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 SBF2Q86WG5 1849 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 SPDYE16A6NNV3 312 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 CDK11BP21127 795 aaKnown RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 MTFR1LQ9H019 292 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 MBIPQ9NS73 344 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 CHPF2Q9P2E5 772 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 NPC1L1Q9UHC9 1359 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 HAX1O00165 279 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 LGR5O75473 907 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 CYP19A1P11511 503 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 LMOD1P29536 600 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-209ENST00000613524 SLC4A10Q6U841 1118 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 SLC51AQ86UW1 340 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 C8orf58Q8NAV2 365 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms