RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 NIP7Q9Y221 180 aaKnown RBP eCLIP13.97□□□□□ -0.17
SSX3-204ENST00000612497 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
SSX3-204ENST00000612497 NOGQ13253 232 aa13.96□□□□□ -0.17
SSX3-204ENST00000612497 CC2D2BQ6DHV5 1058 aa13.96□□□□□ -0.17
SSX3-204ENST00000612497 ZIC5Q96T25 663 aa13.96□□□□□ -0.17
SSX3-204ENST00000612497 NIM1KQ8IY84 436 aa13.95□□□□□ -0.18
SSX3-204ENST00000612497 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
SSX3-204ENST00000612497 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
SSX3-204ENST00000612497 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
SSX3-204ENST00000612497 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
SSX3-204ENST00000612497 AKAP11Q9UKA4 1901 aa13.93□□□□□ -0.18
SSX3-204ENST00000612497 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
SSX3-204ENST00000612497 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
SSX3-204ENST00000612497 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
SSX3-204ENST00000612497 KCNQ3O43525 872 aa13.92□□□□□ -0.18
SSX3-204ENST00000612497 HUNKP57058 714 aa13.92□□□□□ -0.18
SSX3-204ENST00000612497 GRIPAP1Q4V328 841 aa13.92□□□□□ -0.18
SSX3-204ENST00000612497 RPGRQ92834 1020 aaKnown RBP13.92□□□□□ -0.18
SSX3-204ENST00000612497 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
SSX3-204ENST00000612497 CDC37L1Q7L3B6 337 aa13.91□□□□□ -0.18
SSX3-204ENST00000612497 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
SSX3-204ENST00000612497 PGAP2Q9UHJ9 254 aa13.91□□□□□ -0.18
SSX3-204ENST00000612497 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
SSX3-204ENST00000612497 TRPA1O75762 1119 aa13.9□□□□□ -0.18
SSX3-204ENST00000612497 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
SSX3-204ENST00000612497 CRY2Q49AN0 593 aa13.9□□□□□ -0.18
SSX3-204ENST00000612497 NBPF15Q8N660 670 aa13.9□□□□□ -0.18
SSX3-204ENST00000612497 NPC1L1Q9UHC9 1359 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 CXCL9Q07325 125 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 HLFQ16534 295 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 AOC3Q16853 763 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 CTU1Q7Z7A3 348 aaKnown RBP13.89□□□□□ -0.19
SSX3-204ENST00000612497 NUTM1Q86Y26 1132 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
SSX3-204ENST00000612497 GCC1Q96CN9 775 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
SSX3-204ENST00000612497 ABCC12Q96J65 1359 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
SSX3-204ENST00000612497 RGL2O15211 777 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
SSX3-204ENST00000612497 HIRAP54198 1017 aaPredicted RBP13.88□□□□□ -0.19
SSX3-204ENST00000612497 KIF23Q02241 960 aaPredicted RBP13.88□□□□□ -0.19
SSX3-204ENST00000612497 RGMBQ6NW40 437 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 USP48Q86UV5 1035 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 NYXQ9GZU5 481 aa13.88□□□□□ -0.19
SSX3-204ENST00000612497 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
SSX3-204ENST00000612497 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
SSX3-204ENST00000612497 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
SSX3-204ENST00000612497 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
SSX3-204ENST00000612497 HOXA10P31260 410 aaPredicted RBP13.87□□□□□ -0.19
SSX3-204ENST00000612497 TRPM4Q8TD43 1214 aa13.87□□□□□ -0.19
SSX3-204ENST00000612497 CCDC102AQ96A19 550 aa13.87□□□□□ -0.19
SSX3-204ENST00000612497 RBM17Q96I25 401 aaKnown RBP13.87□□□□□ -0.19
SSX3-204ENST00000612497 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
SSX3-204ENST00000612497 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
SSX3-204ENST00000612497 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
SSX3-204ENST00000612497 ZNF157P51786 506 aaPredicted RBP13.86□□□□□ -0.19
SSX3-204ENST00000612497 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
SSX3-204ENST00000612497 DLK2Q6UY11 383 aa13.86□□□□□ -0.19
SSX3-204ENST00000612497 RAD17O75943 681 aa13.85□□□□□ -0.19
SSX3-204ENST00000612497 C2orf69Q8N8R5 385 aa13.85□□□□□ -0.19
SSX3-204ENST00000612497 CRAMP1Q96RY5 1269 aa13.85□□□□□ -0.19
SSX3-204ENST00000612497 VPS33BQ9H267 617 aa13.85□□□□□ -0.19
SSX3-204ENST00000612497 GBA2Q9HCG7 927 aaPredicted RBP13.85□□□□□ -0.19
SSX3-204ENST00000612497 CNOT7Q9UIV1 285 aaKnown RBP13.85□□□□□ -0.19
SSX3-204ENST00000612497 KIF7Q2M1P5 1343 aa13.85□□□□□ -0.19
SSX3-204ENST00000612497 CDHR2Q9BYE9 1310 aa13.85□□□□□ -0.19
SSX3-204ENST00000612497 H7C1D1 291 aa13.84□□□□□ -0.19
SSX3-204ENST00000612497 TNIP1Q15025 636 aa13.84□□□□□ -0.19
SSX3-204ENST00000612497 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
SSX3-204ENST00000612497 NUP98P52948 1817 aa13.84□□□□□ -0.19
SSX3-204ENST00000612497 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.19
SSX3-204ENST00000612497 SHTN1A0MZ66 631 aa13.83□□□□□ -0.2
SSX3-204ENST00000612497 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
SSX3-204ENST00000612497 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
SSX3-204ENST00000612497 HABP4Q5JVS0 413 aaKnown RBP13.83□□□□□ -0.2
SSX3-204ENST00000612497 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
SSX3-204ENST00000612497 CSRNP1Q96S65 589 aa13.83□□□□□ -0.2
SSX3-204ENST00000612497 RIC1Q4ADV7 1423 aa13.82□□□□□ -0.2
SSX3-204ENST00000612497 GPTP24298 496 aa13.82□□□□□ -0.2
SSX3-204ENST00000612497 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
SSX3-204ENST00000612497 KRT26Q7Z3Y9 468 aa13.82□□□□□ -0.2
SSX3-204ENST00000612497 MICALL2Q8IY33 904 aa13.82□□□□□ -0.2
SSX3-204ENST00000612497 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
SSX3-204ENST00000612497 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
SSX3-204ENST00000612497 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
SSX3-204ENST00000612497 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
SSX3-204ENST00000612497 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
SSX3-204ENST00000612497 SLC10A3P09131 477 aa13.8□□□□□ -0.2
SSX3-204ENST00000612497 SUSD4Q5VX71 490 aa13.8□□□□□ -0.2
SSX3-204ENST00000612497 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
SSX3-204ENST00000612497 SAMD7Q7Z3H4 446 aa13.8□□□□□ -0.2
SSX3-204ENST00000612497 DCPSQ96C86 337 aaKnown RBP13.8□□□□□ -0.2
SSX3-204ENST00000612497 RTFDC1Q9BY42 306 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms