RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
PRKN-209ENST00000612485 XAGE3Q8WTP9 111 aa22.6■■□□□ 1.21
PRKN-209ENST00000612485 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
PRKN-209ENST00000612485 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
PRKN-209ENST00000612485 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
PRKN-209ENST00000612485 HOXA10P31260 410 aaPredicted RBP22.58■■□□□ 1.21
PRKN-209ENST00000612485 SMC1BQ8NDV3 1235 aa22.58■■□□□ 1.21
PRKN-209ENST00000612485 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
PRKN-209ENST00000612485 RBM17Q96I25 401 aaKnown RBP22.57■■□□□ 1.2
PRKN-209ENST00000612485 MBIPQ9NS73 344 aa22.57■■□□□ 1.2
PRKN-209ENST00000612485 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
PRKN-209ENST00000612485 CC2D2BQ6DHV5 1058 aa22.56■■□□□ 1.2
PRKN-209ENST00000612485 OLFM4Q6UX06 510 aa22.56■■□□□ 1.2
PRKN-209ENST00000612485 NLRP3Q96P20 1036 aa22.56■■□□□ 1.2
PRKN-209ENST00000612485 IFT57Q9NWB7 429 aa22.56■■□□□ 1.2
PRKN-209ENST00000612485 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
PRKN-209ENST00000612485 WDR90Q96KV7 1748 aa22.56■■□□□ 1.2
PRKN-209ENST00000612485 ZNF853P0CG23 659 aa22.55■■□□□ 1.2
PRKN-209ENST00000612485 GNAI1P63096 354 aa22.55■■□□□ 1.2
PRKN-209ENST00000612485 TCIRG1Q13488 830 aa22.55■■□□□ 1.2
PRKN-209ENST00000612485 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
PRKN-209ENST00000612485 CRAMP1Q96RY5 1269 aa22.55■■□□□ 1.2
PRKN-209ENST00000612485 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
PRKN-209ENST00000612485 SLC10A5Q5PT55 438 aa22.54■■□□□ 1.2
PRKN-209ENST00000612485 NLRP10Q86W26 655 aa22.54■■□□□ 1.2
PRKN-209ENST00000612485 POTECB2RU33 542 aa22.53■■□□□ 1.2
PRKN-209ENST00000612485 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
PRKN-209ENST00000612485 SYNE4Q8N205 404 aa22.53■■□□□ 1.2
PRKN-209ENST00000612485 PSMD1Q99460 953 aa22.53■■□□□ 1.2
PRKN-209ENST00000612485 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
PRKN-209ENST00000612485 ANKRD36CQ5JPF3 1778 aa22.53■■□□□ 1.2
PRKN-209ENST00000612485 DDNO94850 711 aaPredicted RBP22.52■■□□□ 1.2
PRKN-209ENST00000612485 IARSP41252 1262 aaKnown RBP22.52■■□□□ 1.2
PRKN-209ENST00000612485 PLBD2Q8NHP8 589 aa22.52■■□□□ 1.2
PRKN-209ENST00000612485 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
PRKN-209ENST00000612485 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
PRKN-209ENST00000612485 ANKRD13DQ6ZTN6 518 aa22.51■■□□□ 1.19
PRKN-209ENST00000612485 C3orf67Q6ZVT6 689 aa22.51■■□□□ 1.19
PRKN-209ENST00000612485 TRMT112Q9UI30 125 aaKnown RBP22.51■■□□□ 1.19
PRKN-209ENST00000612485 SNED1Q8TER0 1413 aa22.5■■□□□ 1.19
PRKN-209ENST00000612485 TMX4Q9H1E5 349 aaPredicted RBP22.5■■□□□ 1.19
PRKN-209ENST00000612485 SH3TC1Q8TE82 1336 aa22.5■■□□□ 1.19
PRKN-209ENST00000612485 IQCA1LA6NCM1 817 aa22.49■■□□□ 1.19
PRKN-209ENST00000612485 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
PRKN-209ENST00000612485 CHMP4AQ9BY43 222 aa22.48■■□□□ 1.19
PRKN-209ENST00000612485 ANP32CO43423 234 aa22.47■■□□□ 1.19
PRKN-209ENST00000612485 HCLS1P14317 486 aaPredicted RBP22.47■■□□□ 1.19
PRKN-209ENST00000612485 DNAJC5GQ8N7S2 189 aa22.47■■□□□ 1.19
PRKN-209ENST00000612485 JDP2Q8WYK2 163 aa22.47■■□□□ 1.19
PRKN-209ENST00000612485 L3MBTL3Q96JM7 780 aaPredicted RBP22.47■■□□□ 1.19
PRKN-209ENST00000612485 FZD9O00144 591 aa22.46■■□□□ 1.19
PRKN-209ENST00000612485 TCERG1O14776 1098 aaKnown RBP22.46■■□□□ 1.19
PRKN-209ENST00000612485 ISCA1Q9BUE6 129 aa22.46■■□□□ 1.19
PRKN-209ENST00000612485 ABCC4O15439 1325 aa22.46■■□□□ 1.19
PRKN-209ENST00000612485 ZNF541Q9H0D2 1346 aa22.46■■□□□ 1.19
PRKN-209ENST00000612485 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
PRKN-209ENST00000612485 GOLGA2Q08379 1002 aa22.45■■□□□ 1.18
PRKN-209ENST00000612485 ATP6V0A2Q9Y487 856 aa22.45■■□□□ 1.18
PRKN-209ENST00000612485 BBOX1O75936 387 aa22.44■■□□□ 1.18
PRKN-209ENST00000612485 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
PRKN-209ENST00000612485 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
PRKN-209ENST00000612485 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
PRKN-209ENST00000612485 ATP5J2-PTCD1G3V325 749 aa22.43■■□□□ 1.18
PRKN-209ENST00000612485 HTRA3P83110 453 aa22.43■■□□□ 1.18
PRKN-209ENST00000612485 CHADLQ6NUI6 762 aa22.43■■□□□ 1.18
PRKN-209ENST00000612485 RIC3Q7Z5B4 369 aa22.43■■□□□ 1.18
PRKN-209ENST00000612485 LARGE2Q8N3Y3 721 aa22.43■■□□□ 1.18
PRKN-209ENST00000612485 C8orf58Q8NAV2 365 aa22.43■■□□□ 1.18
PRKN-209ENST00000612485 EIF6P56537 245 aaKnown RBP22.42■■□□□ 1.18
PRKN-209ENST00000612485 TRIM28Q13263 835 aaKnown RBP22.42■■□□□ 1.18
PRKN-209ENST00000612485 CCDC30Q5VVM6 783 aa22.42■■□□□ 1.18
PRKN-209ENST00000612485 GPC2Q8N158 579 aa22.42■■□□□ 1.18
PRKN-209ENST00000612485 TAF1DQ9H5J8 278 aaPredicted RBP22.42■■□□□ 1.18
PRKN-209ENST00000612485 SCN4AP35499 1836 aa22.42■■□□□ 1.18
PRKN-209ENST00000612485 GRAPQ13588 217 aa22.41■■□□□ 1.18
PRKN-209ENST00000612485 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
PRKN-209ENST00000612485 SP8Q8IXZ3 490 aa22.41■■□□□ 1.18
PRKN-209ENST00000612485 SUPT20HQ8NEM7 779 aa22.41■■□□□ 1.18
PRKN-209ENST00000612485 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
PRKN-209ENST00000612485 KLRG1Q96E93 195 aa22.41■■□□□ 1.18
PRKN-209ENST00000612485 VPS33BQ9H267 617 aa22.41■■□□□ 1.18
PRKN-209ENST00000612485 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
PRKN-209ENST00000612485 HACL1Q9UJ83 578 aa22.41■■□□□ 1.18
PRKN-209ENST00000612485 LAMB2P55268 1798 aa22.4■■□□□ 1.18
PRKN-209ENST00000612485 LDHDQ86WU2 507 aa22.4■■□□□ 1.18
PRKN-209ENST00000612485 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
PRKN-209ENST00000612485 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
PRKN-209ENST00000612485 FAM89AQ96GI7 184 aa22.4■■□□□ 1.18
PRKN-209ENST00000612485 PPIP5K2O43314 1243 aa22.39■■□□□ 1.17
PRKN-209ENST00000612485 TMC4Q7Z404 712 aa22.39■■□□□ 1.17
PRKN-209ENST00000612485 SLC51AQ86UW1 340 aa22.39■■□□□ 1.17
PRKN-209ENST00000612485 NIM1KQ8IY84 436 aa22.39■■□□□ 1.17
PRKN-209ENST00000612485 DDX58O95786 925 aaKnown RBP22.38■■□□□ 1.17
PRKN-209ENST00000612485 POTEIP0CG38 1075 aa22.38■■□□□ 1.17
PRKN-209ENST00000612485 POTEJP0CG39 1038 aa22.38■■□□□ 1.17
PRKN-209ENST00000612485 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
PRKN-209ENST00000612485 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
PRKN-209ENST00000612485 IL16Q14005 1332 aa22.37■■□□□ 1.17
PRKN-209ENST00000612485 COL4A5P29400 1685 aa22.37■■□□□ 1.17
PRKN-209ENST00000612485 HSP90B1P14625 803 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms