RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	BICC1	Q9H694	974 aa	Known RBP	13.7	□□□□□ -0.22
EP400-208	ENST00000611841	PDRG1	Q9NUG6	133 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	GRM8	O00222	908 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	NEXN	Q0ZGT2	675 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	ARHGEF25	Q86VW2	580 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	FAM227B	Q96M60	508 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	FSD1	Q9BTV5	496 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	RUFY3	Q7L099	469 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	HDAC5	Q9UQL6	1122 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.69	□□□□□ -0.22
EP400-208	ENST00000611841	ADCY9	O60503	1353 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	AOX1	Q06278	1338 aa		13.69	□□□□□ -0.22
EP400-208	ENST00000611841	HOXB7	P09629	217 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	TAF3	Q5VWG9	929 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	CERS3	Q8IU89	383 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	CABLES1	Q8TDN4	633 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	TSPY26P	Q9H489	355 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	CYP46A1	Q9Y6A2	500 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	RGPD8	O14715	1765 aa	Predicted RBP	13.68	□□□□□ -0.22
EP400-208	ENST00000611841	CEMIP	Q8WUJ3	1361 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	SYT1	P21579	422 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	IRX5	P78411	483 aa	Predicted RBP	13.68	□□□□□ -0.22
EP400-208	ENST00000611841	COPS6	Q7L5N1	327 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	EAF2	Q96CJ1	260 aa	Predicted RBP	13.68	□□□□□ -0.22
EP400-208	ENST00000611841	MYD88	Q99836	296 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	HYPK	Q9NX55	129 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	ANKAR	Q7Z5J8	1434 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	STX6	O43752	255 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	ERC1	Q8IUD2	1116 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	LINS1	Q8NG48	757 aa		13.68	□□□□□ -0.22
EP400-208	ENST00000611841	ALDH1L1	O75891	902 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	LARGE1	O95461	756 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	FERMT3	Q86UX7	667 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	PIBF1	Q8WXW3	757 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	USP25	Q9UHP3	1055 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.67	□□□□□ -0.22
EP400-208	ENST00000611841	CHRNA2	Q15822	529 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	XAGE3	Q8WTP9	111 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	EDC3	Q96F86	508 aa	Known RBP	13.67	□□□□□ -0.22
EP400-208	ENST00000611841	TRERF1	Q96PN7	1200 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	TLR7	Q9NYK1	1049 aa	Known RBP	13.67	□□□□□ -0.22
EP400-208	ENST00000611841	NDUFB9	Q9Y6M9	179 aa		13.67	□□□□□ -0.22
EP400-208	ENST00000611841	ATP5J2-PTCD1	G3V325	749 aa		13.66	□□□□□ -0.22
EP400-208	ENST00000611841	PTCD1	O75127	700 aa	Known RBP	13.66	□□□□□ -0.22
EP400-208	ENST00000611841	GJB2	P29033	226 aa		13.66	□□□□□ -0.22
EP400-208	ENST00000611841	STK3	Q13188	491 aa		13.66	□□□□□ -0.22
EP400-208	ENST00000611841	TTC41P	Q6P2S7	1318 aa		13.66	□□□□□ -0.22
EP400-208	ENST00000611841	ZSCAN22	P10073	491 aa	Predicted RBP	13.66	□□□□□ -0.22
EP400-208	ENST00000611841	EVI5L	Q96CN4	794 aa		13.66	□□□□□ -0.22
EP400-208	ENST00000611841	RIOK3	O14730	519 aa	Known RBP	13.66	□□□□□ -0.22
EP400-208	ENST00000611841	NMI	Q13287	307 aa	Predicted RBP	13.66	□□□□□ -0.22
EP400-208	ENST00000611841	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
EP400-208	ENST00000611841	RBM8A	Q9Y5S9	174 aa	Known RBP	13.66	□□□□□ -0.22
EP400-208	ENST00000611841	ARHGAP23	Q9P227	1491 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	RGPD1	P0DJD0	1748 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	SASH1	O94885	1247 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
EP400-208	ENST00000611841	TTC5	Q8N0Z6	440 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	PIK3C2A	O00443	1686 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	ERICH4	A6NGS2	130 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	ZNF790	Q6PG37	636 aa		13.65	□□□□□ -0.22
EP400-208	ENST00000611841	DNAJC2	Q99543	621 aa	Known RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	PHF14	O94880	888 aa		13.64	□□□□□ -0.23
EP400-208	ENST00000611841	TAT	P17735	454 aa	Predicted RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	DNM1	Q05193	864 aa	Known RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	CHAF1A	Q13111	956 aa	Predicted RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	FAM173B	Q6P4H8	233 aa		13.64	□□□□□ -0.23
EP400-208	ENST00000611841	LARP1	Q6PKG0	1096 aa	Known RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	USP16	Q9Y5T5	823 aa		13.64	□□□□□ -0.23
EP400-208	ENST00000611841	LARP1B	Q659C4	914 aa	Known RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	ZNF496	Q96IT1	587 aa	Predicted RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	TTC14	Q96N46	770 aa		13.64	□□□□□ -0.23
EP400-208	ENST00000611841	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.64	□□□□□ -0.23
EP400-208	ENST00000611841	SLIT1	O75093	1534 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	CREB3L3	Q68CJ9	461 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	UBE3B	Q7Z3V4	1068 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	KAZALD1	Q96I82	304 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	ATP6V1D	Q9Y5K8	247 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	TOPAZ1	Q8N9V7	1692 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	IGKV5-2	P06315	115 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	ANKRD13D	Q6ZTN6	518 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	KIF13A	Q9H1H9	1805 aa		13.63	□□□□□ -0.23
EP400-208	ENST00000611841	F13A1	P00488	732 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	HCLS1	P14317	486 aa	Predicted RBP	13.62	□□□□□ -0.23
EP400-208	ENST00000611841	ME3	Q16798	604 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	EPHA10	Q5JZY3	1008 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	GIMAP6	Q6P9H5	292 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	CCDC171	Q6TFL3	1326 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	BLOC1S2	Q6QNY1	142 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	NEUROD6	Q96NK8	337 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841		A0A0D9SFI3	127 aa		13.62	□□□□□ -0.23
EP400-208	ENST00000611841	COL9A3	Q14050	684 aa	Predicted RBP	13.62	□□□□□ -0.23
EP400-208	ENST00000611841	NWD1	Q149M9	1564 aa		13.61	□□□□□ -0.23
EP400-208	ENST00000611841	ADCY5	O95622	1261 aa		13.61	□□□□□ -0.23
EP400-208	ENST00000611841	MTX1	Q13505	466 aa		13.61	□□□□□ -0.23
EP400-208	ENST00000611841	TFIP11	Q9UBB9	837 aa	Known RBP	13.61	□□□□□ -0.23
EP400-208	ENST00000611841	TAOK2	Q9UL54	1235 aa		13.61	□□□□□ -0.23
EP400-208	ENST00000611841	GOLGA6L4	A6NEF3	574 aa		13.61	□□□□□ -0.23
EP400-208	ENST00000611841	ATF3	P18847	181 aa		13.61	□□□□□ -0.23
EP400-208	ENST00000611841	RNF20	Q5VTR2	975 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms