RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 THUMPD2Q9BTF0 503 aaKnown RBP23.04■■□□□ 1.28
MUC1-224ENST00000611577 MIS18AQ9NYP9 233 aa23.04■■□□□ 1.28
MUC1-224ENST00000611577 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
MUC1-224ENST00000611577 ABCC12Q96J65 1359 aa23.03■■□□□ 1.28
MUC1-224ENST00000611577 ITGBL1O95965 494 aaPredicted RBP23.03■■□□□ 1.28
MUC1-224ENST00000611577 NGEFQ8N5V2 710 aa23.03■■□□□ 1.28
MUC1-224ENST00000611577 VEGFBP49765 207 aa23.02■■□□□ 1.28
MUC1-224ENST00000611577 MIER1Q8N108 512 aa23.02■■□□□ 1.28
MUC1-224ENST00000611577 AIDAQ96BJ3 306 aa23.02■■□□□ 1.28
MUC1-224ENST00000611577 ADAMTSL1Q8N6G6 1762 aa23.01■■□□□ 1.27
MUC1-224ENST00000611577 FZD9O00144 591 aa23.01■■□□□ 1.27
MUC1-224ENST00000611577 PNMA8AQ86V59 439 aaPredicted RBP23.01■■□□□ 1.27
MUC1-224ENST00000611577 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
MUC1-224ENST00000611577 NYXQ9GZU5 481 aa23.01■■□□□ 1.27
MUC1-224ENST00000611577 SNED1Q8TER0 1413 aa23■■□□□ 1.27
MUC1-224ENST00000611577 CRY2Q49AN0 593 aa23■■□□□ 1.27
MUC1-224ENST00000611577 PSMD1Q99460 953 aa23■■□□□ 1.27
MUC1-224ENST00000611577 MAP1SQ66K74 1059 aaPredicted RBP22.99■■□□□ 1.27
MUC1-224ENST00000611577 GPC2Q8N158 579 aa22.99■■□□□ 1.27
MUC1-224ENST00000611577 JDP2Q8WYK2 163 aa22.99■■□□□ 1.27
MUC1-224ENST00000611577 CTCFP49711 727 aaPredicted RBP22.98■■□□□ 1.27
MUC1-224ENST00000611577 KIF6Q6ZMV9 814 aa22.98■■□□□ 1.27
MUC1-224ENST00000611577 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
MUC1-224ENST00000611577 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
MUC1-224ENST00000611577 MAP3K15Q6ZN16 1313 aa22.98■■□□□ 1.27
MUC1-224ENST00000611577 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
MUC1-224ENST00000611577 ERVV-1B6SEH8 477 aa22.97■■□□□ 1.27
MUC1-224ENST00000611577 TTLL7Q6ZT98 887 aa22.97■■□□□ 1.27
MUC1-224ENST00000611577 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
MUC1-224ENST00000611577 PRDM10Q9NQV6 1147 aa22.97■■□□□ 1.27
MUC1-224ENST00000611577 TRIM35Q9UPQ4 493 aa22.97■■□□□ 1.27
MUC1-224ENST00000611577 GJA3Q9Y6H8 435 aa22.97■■□□□ 1.27
MUC1-224ENST00000611577 GPTP24298 496 aa22.96■■□□□ 1.27
MUC1-224ENST00000611577 EIF6P56537 245 aaKnown RBP22.96■■□□□ 1.27
MUC1-224ENST00000611577 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
MUC1-224ENST00000611577 CC2D2BQ6DHV5 1058 aa22.96■■□□□ 1.27
MUC1-224ENST00000611577 TSPYL4Q9UJ04 414 aa22.96■■□□□ 1.27
MUC1-224ENST00000611577 COL4A5P29400 1685 aa22.96■■□□□ 1.27
MUC1-224ENST00000611577 MYL6BP14649 208 aa22.95■■□□□ 1.26
MUC1-224ENST00000611577 NUP98P52948 1817 aa22.95■■□□□ 1.26
MUC1-224ENST00000611577 RIC1Q4ADV7 1423 aa22.95■■□□□ 1.26
MUC1-224ENST00000611577 ZBTB3Q9H5J0 574 aa22.95■■□□□ 1.26
MUC1-224ENST00000611577 IBTKQ9P2D0 1353 aaPredicted RBP22.95■■□□□ 1.26
MUC1-224ENST00000611577 SALL2Q9Y467 1007 aaPredicted RBP22.95■■□□□ 1.26
MUC1-224ENST00000611577 UBN2Q6ZU65 1347 aa22.94■■□□□ 1.26
MUC1-224ENST00000611577 RASSF10A6NK89 507 aa22.94■■□□□ 1.26
MUC1-224ENST00000611577 LMOD1P29536 600 aaPredicted RBP22.94■■□□□ 1.26
MUC1-224ENST00000611577 EIF4A1P60842 406 aaKnown RBP22.94■■□□□ 1.26
MUC1-224ENST00000611577 HOXA10P31260 410 aaPredicted RBP22.93■■□□□ 1.26
MUC1-224ENST00000611577 DEFB115Q30KQ5 88 aa22.93■■□□□ 1.26
MUC1-224ENST00000611577 WBP1LQ9NX94 342 aa22.93■■□□□ 1.26
MUC1-224ENST00000611577 ABT1Q9ULW3 272 aaKnown RBP22.93■■□□□ 1.26
MUC1-224ENST00000611577 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
MUC1-224ENST00000611577 SLC51AQ86UW1 340 aa22.92■■□□□ 1.26
MUC1-224ENST00000611577 LARGE2Q8N3Y3 721 aa22.92■■□□□ 1.26
MUC1-224ENST00000611577 RBM17Q96I25 401 aaKnown RBP22.92■■□□□ 1.26
MUC1-224ENST00000611577 LTBP1Q14766 1721 aa22.91■■□□□ 1.26
MUC1-224ENST00000611577 TCERG1O14776 1098 aaKnown RBP22.91■■□□□ 1.26
MUC1-224ENST00000611577 PPEF1O14829 653 aaPredicted RBP22.91■■□□□ 1.26
MUC1-224ENST00000611577 LBX1P52954 281 aa22.91■■□□□ 1.26
MUC1-224ENST00000611577 GRIPAP1Q4V328 841 aa22.91■■□□□ 1.26
MUC1-224ENST00000611577 CRAMP1Q96RY5 1269 aa22.9■■□□□ 1.26
MUC1-224ENST00000611577 DDX21Q9NR30 783 aaKnown RBP eCLIP22.9■■□□□ 1.26
MUC1-224ENST00000611577 BABAM1Q9NWV8 329 aa22.9■■□□□ 1.26
MUC1-224ENST00000611577 WDR33Q9C0J8 1336 aaKnown RBP22.89■■□□□ 1.26
MUC1-224ENST00000611577 NTSR2O95665 410 aa22.89■■□□□ 1.25
MUC1-224ENST00000611577 SCNN1DP51172 638 aa22.89■■□□□ 1.25
MUC1-224ENST00000611577 C3orf67Q6ZVT6 689 aa22.89■■□□□ 1.25
MUC1-224ENST00000611577 ZNF34Q8IZ26 560 aa22.89■■□□□ 1.25
MUC1-224ENST00000611577 EPS15P42566 896 aa22.88■■□□□ 1.25
MUC1-224ENST00000611577 CCDC27Q2M243 656 aa22.88■■□□□ 1.25
MUC1-224ENST00000611577 NIM1KQ8IY84 436 aa22.88■■□□□ 1.25
MUC1-224ENST00000611577 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
MUC1-224ENST00000611577 HSPA8P11142 646 aaKnown RBP22.87■■□□□ 1.25
MUC1-224ENST00000611577 GNAI1P63096 354 aa22.87■■□□□ 1.25
MUC1-224ENST00000611577 GIGYF2Q6Y7W6 1299 aaKnown RBP22.87■■□□□ 1.25
MUC1-224ENST00000611577 WWC1Q8IX03 1113 aa22.87■■□□□ 1.25
MUC1-224ENST00000611577 CFAP44Q96MT7 982 aa22.87■■□□□ 1.25
MUC1-224ENST00000611577 PPIP5K2O43314 1243 aa22.86■■□□□ 1.25
MUC1-224ENST00000611577 MAP2K1Q02750 393 aaPredicted RBP22.86■■□□□ 1.25
MUC1-224ENST00000611577 NCBP3Q53F19 620 aaKnown RBP22.86■■□□□ 1.25
MUC1-224ENST00000611577 PAXIP1Q6ZW49 1069 aaPredicted RBP22.86■■□□□ 1.25
MUC1-224ENST00000611577 PPP1R42Q7Z4L9 355 aa22.86■■□□□ 1.25
MUC1-224ENST00000611577 CHL1O00533 1208 aa22.85■■□□□ 1.25
MUC1-224ENST00000611577 FMR1Q06787 632 aaKnown RBP eCLIP22.85■■□□□ 1.25
MUC1-224ENST00000611577 PARP10Q53GL7 1025 aa22.85■■□□□ 1.25
MUC1-224ENST00000611577 TMX4Q9H1E5 349 aaPredicted RBP22.85■■□□□ 1.25
MUC1-224ENST00000611577 IFT57Q9NWB7 429 aa22.85■■□□□ 1.25
MUC1-224ENST00000611577 AOC3Q16853 763 aa22.84■■□□□ 1.25
MUC1-224ENST00000611577 USP50Q70EL3 339 aaPredicted RBP22.84■■□□□ 1.25
MUC1-224ENST00000611577 NLRP3Q96P20 1036 aa22.84■■□□□ 1.25
MUC1-224ENST00000611577 GRM1Q13255 1194 aa22.83■■□□□ 1.25
MUC1-224ENST00000611577 CAPNS2Q96L46 248 aa22.83■■□□□ 1.25
MUC1-224ENST00000611577 THSD7BQ9C0I4 1608 aa22.82■■□□□ 1.24
MUC1-224ENST00000611577 TRAF5O00463 557 aa22.82■■□□□ 1.24
MUC1-224ENST00000611577 UTP14AQ9BVJ6 771 aaKnown RBP22.82■■□□□ 1.24
MUC1-224ENST00000611577 MBIPQ9NS73 344 aa22.82■■□□□ 1.24
MUC1-224ENST00000611577 ATP6V0A2Q9Y487 856 aa22.82■■□□□ 1.24
MUC1-224ENST00000611577 ABCC4O15439 1325 aa22.82■■□□□ 1.24
MUC1-224ENST00000611577 EIF2S2P20042 333 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms