RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 LMOD1P29536 600 aaPredicted RBP16.14■□□□□ 0.17
MUC1-223ENST00000611571 DHX37Q8IY37 1157 aaKnown RBP16.14■□□□□ 0.17
MUC1-223ENST00000611571 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 SAMD9Q5K651 1589 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 CCDC66A2RUB6 948 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 RUFY1Q96T51 708 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
MUC1-223ENST00000611571 TOP1P11387 765 aaKnown RBP16.14■□□□□ 0.17
MUC1-223ENST00000611571 RXRAP19793 462 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 UVSSAQ2YD98 709 aa16.14■□□□□ 0.17
MUC1-223ENST00000611571 APOBRQ0VD83 1088 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
MUC1-223ENST00000611571 NPATQ14207 1427 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 NAPBQ9H115 298 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 ZHX3Q9H4I2 956 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
MUC1-223ENST00000611571 ARHGAP29Q52LW3 1261 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 LDHAL6AQ6ZMR3 332 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 SNX14Q9Y5W7 946 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 KDM5CP41229 1560 aa16.13■□□□□ 0.17
MUC1-223ENST00000611571 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 CEP135Q66GS9 1140 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 IFIT3O14879 490 aaKnown RBP16.12■□□□□ 0.17
MUC1-223ENST00000611571 TIMM10P62072 90 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 PLEKHF1Q96S99 279 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 INSRP06213 1382 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 TMCO3Q6UWJ1 677 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 UNC5CLQ8IV45 518 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
MUC1-223ENST00000611571 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
MUC1-223ENST00000611571 WDR7Q9Y4E6 1490 aa16.11■□□□□ 0.17
MUC1-223ENST00000611571 CDKL5O76039 1030 aa16.11■□□□□ 0.17
MUC1-223ENST00000611571 SSBP05455 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
MUC1-223ENST00000611571 STX1AQ16623 288 aa16.11■□□□□ 0.17
MUC1-223ENST00000611571 INTS4Q96HW7 963 aaKnown RBP16.11■□□□□ 0.17
MUC1-223ENST00000611571 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
MUC1-223ENST00000611571 NCOA5Q9HCD5 579 aaKnown RBP16.11■□□□□ 0.17
MUC1-223ENST00000611571 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
MUC1-223ENST00000611571 DNA2P51530 1060 aa16.11■□□□□ 0.17
MUC1-223ENST00000611571 PRIMPOLQ96LW4 560 aa16.11■□□□□ 0.17
MUC1-223ENST00000611571 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
MUC1-223ENST00000611571 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
MUC1-223ENST00000611571 ZNF445P59923 1031 aa16.1■□□□□ 0.17
MUC1-223ENST00000611571 SBNO2Q9Y2G9 1366 aa16.1■□□□□ 0.17
MUC1-223ENST00000611571 CBFA2T2O43439 604 aa16.1■□□□□ 0.17
MUC1-223ENST00000611571 TRMT112Q9UI30 125 aaKnown RBP16.1■□□□□ 0.17
MUC1-223ENST00000611571 RIMS2Q9UQ26 1411 aa16.1■□□□□ 0.17
MUC1-223ENST00000611571 EIF2AK4Q9P2K8 1649 aaKnown RBP16.1■□□□□ 0.17
MUC1-223ENST00000611571 CCP110O43303 1012 aa16.1■□□□□ 0.17
MUC1-223ENST00000611571 TXLNAP40222 546 aa16.1■□□□□ 0.17
MUC1-223ENST00000611571 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
MUC1-223ENST00000611571 MAGEC2Q9UBF1 373 aaPredicted RBP16.1■□□□□ 0.17
MUC1-223ENST00000611571 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
MUC1-223ENST00000611571 KCNQ3O43525 872 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 KIF4BQ2VIQ3 1234 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 TFCP2Q12800 502 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 PUS7Q96PZ0 661 aaKnown RBP16.09■□□□□ 0.17
MUC1-223ENST00000611571 DNAI1Q9UI46 699 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 SGSM2O43147 1006 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 GTF2F1P35269 517 aaKnown RBP eCLIP16.09■□□□□ 0.17
MUC1-223ENST00000611571 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
MUC1-223ENST00000611571 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 LINS1Q8NG48 757 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
MUC1-223ENST00000611571 A0A1B0GVL5 298 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.17
MUC1-223ENST00000611571 RUFY3Q7L099 469 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 PLA2R1Q13018 1463 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.17
MUC1-223ENST00000611571 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
MUC1-223ENST00000611571 USP44Q9H0E7 712 aa16.08■□□□□ 0.16
MUC1-223ENST00000611571 CENPHQ9H3R5 247 aa16.08■□□□□ 0.16
MUC1-223ENST00000611571 FSD2A1L4K1 749 aa16.08■□□□□ 0.16
MUC1-223ENST00000611571 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 ENOX2Q16206 610 aaKnown RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 HELBQ8NG08 1087 aaPredicted RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 IARSP41252 1262 aaKnown RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 GNG11P61952 73 aa16.08■□□□□ 0.16
MUC1-223ENST00000611571 ACBD3Q9H3P7 528 aa16.08■□□□□ 0.16
MUC1-223ENST00000611571 NSFL1CQ9UNZ2 370 aaKnown RBP16.08■□□□□ 0.16
MUC1-223ENST00000611571 CCDC171Q6TFL3 1326 aa16.07■□□□□ 0.16
MUC1-223ENST00000611571 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
MUC1-223ENST00000611571 ABCC1P33527 1531 aa16.07■□□□□ 0.16
MUC1-223ENST00000611571 JAK2O60674 1132 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms